RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 FKBP9P1Q75LS8 142 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 BTN2A1Q7KYR7 527 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 FAM90A1Q86YD7 464 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 C1orf87Q8N0U7 546 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 OR6V1Q8N148 313 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SCCPDHQ8NBX0 429 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 OR5L1Q8NGL2 311 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TSPEARQ8WU66 669 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SSMEM1Q8WWF3 244 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 ST8SIA4Q92187 359 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 RCN3Q96D15 328 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 MAGEB18Q96M61 343 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 COG8Q96MW5 612 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 NMNAT3Q96T66 252 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 PITX2Q99697 317 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SH3GL1Q99961 368 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 ADAT1Q9BUB4 502 aaKnown RBP7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 HCAR1Q9BXC0 346 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SIRPDQ9H106 197 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TOR3AQ9H497 397 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 NRIP3Q9NQ35 241 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SIRT7Q9NRC8 400 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 C1orf123Q9NWV4 160 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 SIGLEC7Q9Y286 467 aa7.13□□□□□ -1.27
SHKBP1-220ENST00000599716 TET2Q6N021 2002 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 A6NLC8 198 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 IFNL4K9M1U5 179 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 LGALS8O00214 317 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 P2RY10O00398 339 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 CXCR6O00574 342 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 DVL1O14640 695 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 CLPXO76031 633 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC2A1P11166 492 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 SELLP14151 372 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 TUBG1P23258 451 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 IFNA8P32881 189 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 MDH1P40925 334 aaKnown RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 CD200P41217 278 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 GATA4P43694 442 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 IER3P46695 156 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 OMPP47874 163 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 RGS6P49758 472 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 GMFBP60983 142 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF92Q03936 586 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 LIPEQ05469 1076 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 KRTAP27-1Q3LI81 207 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 IFI44LQ53G44 452 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 METTL11BQ5VVY1 283 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 COLCA1Q6ZS62 124 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 VMO1Q7Z5L0 202 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 LYG1Q8N1E2 194 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 FAM86B1Q8N7N1 296 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 GJC3Q8NFK1 279 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 OR11L1Q8NGX0 322 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 OR4K13Q8NH42 304 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 OR52J3Q8NH60 311 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 Q8TCH9 128 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 SPRYD4Q8WW59 207 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNRF4Q8WWF5 429 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 LZICQ8WZA0 190 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 DYRK2Q92630 601 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ITPKCQ96DU7 683 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 FAM71F1Q96KD3 344 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ERMAPQ96PL5 475 aaPredicted RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 COQ7Q99807 217 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 HDHD2Q9H0R4 259 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 PNRC2Q9NPJ4 139 aaKnown RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 RPRD1BQ9NQG5 326 aaKnown RBP7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 SAR1AQ9NR31 198 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 TUBG2Q9NRH3 451 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ERVK-18Q9QC07 812 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ONECUT1Q9UBC0 465 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 RNF7Q9UBF6 113 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 B9D1Q9UPM9 204 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 V9GYQ6 96 aa7.12□□□□□ -1.27
SHKBP1-220ENST00000599716 ZNF816-ZNF321PA0A0X1KG74 233 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 A0A1B0GWJ7 208 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 hCG_1807616A0A1W2PRN6 198 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 OOEPA6NGQ2 149 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 TVP23AA6NH52 213 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 CD300LBA8K4G0 201 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 NME4O00746 187 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 PLXNB1O43157 2135 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 HLA-DQA2P01906 255 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 HIST1H1CP16403 213 aaKnown RBP7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 PYCR1P32322 319 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 COX10Q12887 443 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 TRAP1Q12931 704 aaKnown RBP7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 PDCD1Q15116 288 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 GLYATL3Q5SZD4 288 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 PGAP1Q75T13 922 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 RRM2BQ7LG56 351 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 MRPL21Q7Z2W9 205 aaKnown RBP7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 WDR86Q86TI4 376 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 SLC15A3Q8IY34 581 aa7.11□□□□□ -1.27
SHKBP1-220ENST00000599716 RNF113BQ8IZP6 322 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms