RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ZNF224Q9NZL3 707 aa4.7□□□□□ -1.66
DNMT1-220ENST00000589351 STX18Q9P2W9 335 aaKnown RBP4.7□□□□□ -1.66
DNMT1-220ENST00000589351 DNAJB11Q9UBS4 358 aa4.7□□□□□ -1.66
DNMT1-220ENST00000589351 HSPB7Q9UBY9 170 aa4.7□□□□□ -1.66
DNMT1-220ENST00000589351 SVEP1Q4LDE5 3571 aa4.7□□□□□ -1.66
DNMT1-220ENST00000589351 A0A0B4J2E0 115 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 A0A1B0GX12 115 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 A0A1W2PRG6 482 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 GMNCA6NCL1 334 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 OOEPA6NGQ2 149 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ANXA2P2A6NMY6 339 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 CENPBD1B2RD01 187 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 MCIDASD6RGH6 385 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 H3BSA7 217 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 M0QZ24 198 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SDHDO14521 159 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 TIMM23O14925 209 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 UBDO15205 165 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SURF4O15260 269 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SPRY3O43610 288 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 HPRP00739 348 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 IGHG1P01857 330 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 C1QCP02747 245 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 PATE4P0C8F1 98 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 UMPSP11172 480 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 CCL2P13500 99 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 BGNP21810 368 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 TUBG1P23258 451 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 STOMP27105 288 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 EPHA3P29320 983 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 IL12AP29459 219 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 GDI2P50395 445 aaKnown RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 CDK6Q00534 326 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ZNF154Q13106 437 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ZIK1Q3SY52 487 aaPredicted RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ESCO2Q56NI9 601 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SPATA46Q5T0L3 261 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 THEM4Q5T1C6 240 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ZNF613Q6PF04 617 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 BTNL3Q6UXE8 466 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 C17orf107Q6ZR85 190 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ZNF584Q8IVC4 421 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 LRRC18Q8N456 261 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 OR4K5Q8NGD3 323 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 OR52E2Q8NGJ4 325 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 OR13C2Q8NGS9 318 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 OR14K1Q8NGZ2 314 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 RNASE8Q8TDE3 154 aaKnown RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 BCAS4Q8TDM0 211 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SLC26A7Q8TE54 656 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 THRSPQ92748 146 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 DCLRE1CQ96SD1 692 aaKnown RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SORT1Q99523 831 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 PKP2Q99959 881 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SH3GL3Q99963 347 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 TMEM109Q9BVC6 243 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 C20orf27Q9GZN8 174 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 CENPHQ9H3R5 247 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 WDR55Q9H6Y2 383 aaPredicted RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 BEX1Q9HBH7 125 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 ESM1Q9NQ30 184 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 TUBG2Q9NRH3 451 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 MRPS18AQ9NVS2 196 aaKnown RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 THAP1Q9NVV9 213 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 IL20RAQ9UHF4 553 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 PURGQ9UJV8 347 aaKnown RBP4.69□□□□□ -1.66
DNMT1-220ENST00000589351 SLC45A2Q9UMX9 530 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 CHST2Q9Y4C5 530 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 NPTNQ9Y639 398 aa4.69□□□□□ -1.66
DNMT1-220ENST00000589351 IGKV1D-42A0A075B6H8 117 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 ELOVL7A1L3X0 281 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 C5orf49A4QMS7 147 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 HTR3EA5X5Y0 456 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 DNAJC9-AS1A6NH13 148 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 BLOC1S5-TXNDC5H3BN57 136 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 CLDN34H7C241 214 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 CHP2O43745 196 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 TIMM8AO60220 97 aaPredicted RBP4.68□□□□□ -1.66
DNMT1-220ENST00000589351 MFN2O95140 757 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 CH25HO95992 272 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 IGHV1-46P01743 117 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 IGHMP01871 453 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 LIPFP07098 398 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PPIAL4GP0DN37 164 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 GSTM3P21266 225 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 HTR2AP28223 471 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PCGF2P35227 344 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 DAP3P51398 398 aaKnown RBP4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PTTG1IPP53801 180 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PRRX1P54821 245 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 CDH12P55289 794 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 SNU13P55769 128 aaKnown RBP4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PCBD1P61457 104 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 TNFAIP6P98066 277 aaPredicted RBP4.68□□□□□ -1.66
DNMT1-220ENST00000589351 BST1Q10588 318 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 NPTX1Q15818 432 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 TMEM155Q4W5P6 130 aa4.68□□□□□ -1.66
DNMT1-220ENST00000589351 PLA1AQ53H76 456 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms