RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 TMEFF2Q9UIK5 374 aaPredicted RBP9.38□□□□□ -0.91
DDB1-222ENST00000543627 IKZF2Q9UKS7 526 aa9.38□□□□□ -0.91
DDB1-222ENST00000543627 GTF2A1LQ9UNN4 478 aa9.38□□□□□ -0.91
DDB1-222ENST00000543627 CSPG4Q6UVK1 2322 aa9.38□□□□□ -0.91
DDB1-222ENST00000543627 F5H5P2 479 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 J3QW42 95 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 ZNF205O95201 554 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 APOL3O95236 402 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 TNFRSF1AP19438 455 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 CA6P23280 308 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 ANOS1P23352 680 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 ZNF121P58317 390 aaPredicted RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 OR8G1Q15617 311 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 PCK2Q16822 640 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 KRTAP27-1Q3LI81 207 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 C6orf52Q5T4I8 152 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 C12orf73Q69YU5 71 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 FAM166AQ6J272 317 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 COLCA1Q6ZS62 124 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 IL17RELQ6ZVW7 336 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 SLC16A9Q7RTY1 509 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 CBR4Q8N4T8 237 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 BOLLQ8N9W6 283 aaKnown RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 CLDND2Q8NHS1 167 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 OTOSQ8NHW6 89 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 ZNF420Q8TAQ5 688 aaPredicted RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 FAM81AQ8TBF8 368 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 MSI2Q96DH6 328 aaKnown RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 GAL3ST1Q99999 423 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 SOX7Q9BT81 388 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 TOR3AQ9H497 397 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 SP140LQ9H930 580 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 IMPAD1Q9NX62 359 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 DCAF16Q9NXF7 216 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 KCNS2Q9ULS6 477 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 PPP1R3CQ9UQK1 317 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 KLHDC2Q9Y2U9 406 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 WIPI2Q9Y4P8 454 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 CHD3Q12873 2000 aaKnown RBP9.37□□□□□ -0.91
DDB1-222ENST00000543627 MTORP42345 2549 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 ZANQ9Y493 2812 aa9.37□□□□□ -0.91
DDB1-222ENST00000543627 CCDC182A6NF36 153 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 CD300LBA8K4G0 201 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 IQCF6A8MYZ5 107 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 MAGEB4O15481 346 aaPredicted RBP9.36□□□□□ -0.91
DDB1-222ENST00000543627 LMX1BO60663 402 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 RP2O75695 350 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 APOC1P02654 83 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 SLC2A5P22732 501 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 SRP9P49458 86 aaKnown RBP9.36□□□□□ -0.91
DDB1-222ENST00000543627 CDH15P55291 814 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 CDC42P60953 191 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
DDB1-222ENST00000543627 SLC3A1Q07837 685 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 KCTD18Q6PI47 426 aaPredicted RBP9.36□□□□□ -0.91
DDB1-222ENST00000543627 ZBTB49Q6ZSB9 765 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 MOGAT3Q86VF5 341 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 SLC35F2Q8IXU6 374 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 OR51G2Q8NGK0 314 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 RNF133Q8WVZ7 376 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 UBE2FQ969M7 185 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 EME1Q96AY2 570 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 SGK3Q96BR1 496 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 CNN2Q99439 309 aaKnown RBP9.36□□□□□ -0.91
DDB1-222ENST00000543627 OR10A2Q9H208 303 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 MARCH7Q9H992 704 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 UFSP2Q9NUQ7 469 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 IL19Q9UHD0 177 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 PCDHB10Q9UN67 800 aa9.36□□□□□ -0.91
DDB1-222ENST00000543627 ABCA1O95477 2261 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
DDB1-222ENST00000543627 SLC22A31A6NKX4 558 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 ANKRD30BLA7E2S9 258 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 ZNF670-ZNF695F2Z2N8 137 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 MLNRO43193 412 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 XRCC2O43543 280 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 CYB5R3P00387 301 aaPredicted RBP9.35□□□□□ -0.91
DDB1-222ENST00000543627 GRPP07492 148 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 CD55P08174 381 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 TACSTD2P09758 323 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 IRF2P14316 349 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
DDB1-222ENST00000543627 OPRL1P41146 370 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 ALDH3A2P51648 485 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 CXCR4P61073 352 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 PRAMEF6Q5VXH4 476 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 NXNL2Q5VZ03 156 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 GID4Q8IVV7 300 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 GALNT4Q8N4A0 578 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 OR56B2PQ8NGI1 322 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 MEGF10Q96KG7 1140 aa9.35□□□□□ -0.91
DDB1-222ENST00000543627 SLC30A2Q9BRI3 323 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms