RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 AFF3P51826 1226 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 CFHR1Q03591 330 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 RBM39Q14498 530 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 ZNF626Q68DY1 528 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 CMIPQ8IY22 773 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 OR5H2Q8NGV7 314 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 ARHGAP5-AS1Q96IT6 56 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 C7orf50Q9BRJ6 194 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 TRAF4Q9BUZ4 470 aaPredicted RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 PLEKHJ1Q9NW61 149 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 FAM96BQ9Y3D0 163 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 F8W036 122 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 BLOC1S1P78537 153 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 CCL7P80098 99 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 ATPAF1Q5TC12 328 aaPredicted RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 TMEM244Q5VVB8 128 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 CPEB2Q7Z5Q1 589 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 WDFY1Q8IWB7 410 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 PNLDC1Q8NA58 520 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 OR14L1PQ8NHC6 308 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 PHB2Q99623 299 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 WNT16Q9UBV4 365 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 MLXQ9UH92 298 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 RBM7Q9Y580 266 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 CSAG2Q9Y5P2 127 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 DSPP15924 2871 aaKnown RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 SIGLEC6O43699 453 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 ZNF254O75437 659 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 BGLAPP02818 100 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 KLK3P07288 261 aaPredicted RBP11.99□□□□□ -0.49
GPC1-209ENST00000495100 CCL4P13236 92 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 GLRA1P23415 457 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 BIVMQ86UB2 503 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 KLK13Q9UKR3 277 aa11.99□□□□□ -0.49
GPC1-209ENST00000495100 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 GIPP09681 153 aaPredicted RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 CXCL12P48061 93 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 CX3CR1P49238 355 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 GABREP78334 506 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 TMEM65Q6PI78 240 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 ATRAIDQ6UW56 229 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 PEG10Q86TG7 708 aaKnown RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 PPP1R3BQ86XI6 285 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 GPR137Q96N19 417 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 BOD1L1Q8NFC6 3051 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 A0A096LPE4 126 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 A0A1W2PPZ6 126 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 C5orf63A6NC05 138 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 TLX3O43711 291 aaPredicted RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 GAAP10253 952 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 DAP3P51398 398 aaKnown RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.98□□□□□ -0.49
GPC1-209ENST00000495100 OR1M1Q8NGA1 313 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 AKR7LQ8NHP1 331 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 PIPOXQ9P0Z9 390 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 MRPS17Q9Y2R5 130 aaKnown RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 LOC400499M0QZD8 3231 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 ALG1L2C9J202 215 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 XRCC2O43543 280 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 DIRAS3O95661 229 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 IGHG1P01857 330 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 CD53P19397 219 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 ZNF845Q96IR2 970 aaPredicted RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 ZNF768Q9H5H4 540 aaKnown RBP11.98□□□□□ -0.49
GPC1-209ENST00000495100 GAREM1Q9H706 876 aa11.98□□□□□ -0.49
GPC1-209ENST00000495100 CACNA1BQ00975 2339 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 POU2F2P09086 479 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 CBR1P16152 277 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 C6orf201Q7Z4U5 140 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 ADIPOR1Q96A54 375 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 FOXRED1Q96CU9 486 aaPredicted RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 NMNAT2Q9BZQ4 307 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 CHST11Q9NPF2 352 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 NXT1Q9UKK6 140 aaKnown RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 R4GMQ9 66 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 NCOA6Q14686 2063 aaPredicted RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 PRR19A6NJB7 356 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 MTCP1P56278 107 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DCDP81605 110 aaKnown RBP11.97□□□□□ -0.49
GPC1-209ENST00000495100 EGR3Q06889 387 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 PIGCQ92535 297 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 SLC19A3Q9BZV2 496 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 HEXA-AS1Q9H8Q6 139 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 ETV7Q9Y603 341 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 A0A1B0GW55 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 TGM6O95932 706 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4L2P0CJ85 424 aa11.97□□□□□ -0.49
GPC1-209ENST00000495100 DUX4L3P0CJ86 424 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms