RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	DVL1	O14640	695 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	PPP1R3D	O95685	299 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	TXNDC12	O95881	172 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	NPPA	P01160	153 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	LCAT	P04180	440 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	MDH1	P40925	334 aa	Known RBP	11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	OMP	P47874	163 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	DLX1	P56177	255 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	TRAP1	Q12931	704 aa	Known RBP	11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	BEAN1	Q3B7T3	259 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	COQ5	Q5HYK3	327 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	PGAP1	Q75T13	922 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	VMO1	Q7Z5L0	202 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	ADCK1	Q86TW2	530 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	FAM90A1	Q86YD7	464 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	PNLDC1	Q8NA58	520 aa	Known RBP	11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	SLC26A10	Q8NG04	563 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	RSRC1	Q96IZ7	334 aa	Known RBP	11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	HSH2D	Q96JZ2	352 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	PITX2	Q99697	317 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	FN3KRP	Q9HA64	309 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	C1orf123	Q9NWV4	160 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	ADA2	Q9NZK5	511 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	B9D1	Q9UPM9	204 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	ZNF281	Q9Y2X9	895 aa		11.28	□□□□□ -0.6
SAMM50-204	ENST00000493161	OOEP	A6NGQ2	149 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	CD300LB	A8K4G0	201 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	PTBP3	O95758	552 aa	Known RBP	11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	EGR3	Q06889	387 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	SEC23B	Q15437	767 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	SNAI3	Q3KNW1	292 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	IFI44L	Q53G44	452 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	DPY19L2P2	Q6ZN68	376 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	GDPGP1	Q6ZNW5	385 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	FKBP9P1	Q75LS8	142 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	CBLL1	Q75N03	491 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	RRM2B	Q7LG56	351 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	GCSAM	Q8N6F7	178 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	OR2AE1	Q8NHA4	323 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	NMNAT3	Q96T66	252 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	ATF6B	Q99941	703 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	ADAT1	Q9BUB4	502 aa	Known RBP	11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	FN3K	Q9H479	309 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	DNAJB11	Q9UBS4	358 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	TMEM5	Q9Y2B1	443 aa		11.27	□□□□□ -0.61
SAMM50-204	ENST00000493161	TRBV4-1	A0A0J9YWV2	114 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161		A0A1W2PRD5	423 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161		A0A1W2PRF3	423 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161		A0A1W2PRM7	423 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	UNC119B	A6NIH7	251 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	BBIP1	A8MTZ0	92 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	CXCR6	O00574	342 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	SERPINA1	P01009	418 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	GRP	P07492	148 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	CSF1	P09603	554 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	GGT2	P36268	569 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	ZNF92	Q03936	586 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	LIPE	Q05469	1076 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	MALL	Q13021	153 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	KCNJ8	Q15842	424 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	C2orf68	Q2NKX9	166 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161		Q6ZPA2	131 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	MRPL21	Q7Z2W9	205 aa	Known RBP	11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	ST8SIA4	Q92187	359 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	RCN3	Q96D15	328 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	MAP6	Q96JE9	813 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	ERMAP	Q96PL5	475 aa	Predicted RBP	11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	NDEL1	Q9GZM8	345 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	DPAGT1	Q9H3H5	408 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	CNTD2	Q9H8S5	307 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	SAR1A	Q9NR31	198 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	GID8	Q9NWU2	228 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	SIGLEC9	Q9Y336	463 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	ENPP4	Q9Y6X5	453 aa		11.26	□□□□□ -0.61
SAMM50-204	ENST00000493161	TRAV38-1	A0A0B4J264	116 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	GMDS	O60547	372 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	TSPAN9	O75954	239 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	LHB	P01229	141 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	PSKH1	P11801	424 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	CRABP1	P29762	137 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	RPS27	P42677	84 aa	Known RBP	11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	RPS6KA3	P51812	740 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	CDON	Q4KMG0	1287 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	FGD3	Q5JSP0	725 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	GLYATL3	Q5SZD4	288 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	SLC35E4	Q6ICL7	350 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	PGM2L1	Q6PCE3	622 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	DNM1P34	Q6PK57	102 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	SLC15A3	Q8IY34	581 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	PNKD	Q8N490	385 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	OR4K13	Q8NH42	304 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	SEH1L	Q96EE3	360 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	CCL13	Q99616	98 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	SIKE1	Q9BRV8	207 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	ANKRD19P	Q9H560	264 aa		11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	RPRD1B	Q9NQG5	326 aa	Known RBP	11.25	□□□□□ -0.61
SAMM50-204	ENST00000493161	SIRT7	Q9NRC8	400 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms