RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 BRCA2P51587 3418 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 A0A0B4J2E0 115 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 A0A1B0GX12 115 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 LDB3O75112 727 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 CRYABP02511 175 aaKnown RBP16.68■□□□□ 0.26
PTPA-223ENST00000452489 GAPDHP04406 335 aaKnown RBP16.68■□□□□ 0.26
PTPA-223ENST00000452489 GIMD1P0DJR0 217 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 CDKN2AP42771 156 aaKnown RBP16.68■□□□□ 0.26
PTPA-223ENST00000452489 SLC22A25Q6T423 547 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 AQP3Q92482 292 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 SH3BGRL3Q9H299 93 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 HCSTQ9UBK5 93 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 PLXNA2O75051 1894 aa16.68■□□□□ 0.26
PTPA-223ENST00000452489 SFT2D2O95562 160 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
PTPA-223ENST00000452489 SUPT4H1P63272 117 aaKnown RBP16.67■□□□□ 0.26
PTPA-223ENST00000452489 IL15RAQ13261 267 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 ADGRE4PQ86SQ3 457 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 HOGA1Q86XE5 327 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 CHST4Q8NCG5 386 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 OR51A2Q8NGJ7 313 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 RNASEH2CQ8TDP1 164 aaKnown RBP16.67■□□□□ 0.26
PTPA-223ENST00000452489 ADGRG7Q96K78 797 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 TM7SF3Q9NS93 570 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 SLC22A13Q9Y226 551 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 DOCK3Q8IZD9 2030 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 APBA3O96018 575 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 TAS2R31P59538 309 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 ARSJQ5FYB0 599 aaPredicted RBP16.67■□□□□ 0.26
PTPA-223ENST00000452489 ZNF619Q8N2I2 560 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 RCBTB1Q8NDN9 531 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 SHDQ96IW2 340 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 FAM210BQ96KR6 192 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 ZNF385AQ96PM9 386 aaKnown RBP16.67■□□□□ 0.26
PTPA-223ENST00000452489 OR11A1Q9GZK7 315 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 TAS2R4Q9NYW5 299 aa16.67■□□□□ 0.26
PTPA-223ENST00000452489 K7ESM1 405 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 PQBP1O60828 265 aaKnown RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 DNAJB6O75190 326 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 DBIP07108 87 aaKnown RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 PNLIPP16233 465 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 RABIFP47224 123 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 POLR2LP62875 67 aaKnown RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 AADACL3Q5VUY0 350 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 TANGO2Q6ICL3 276 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 TEX38Q6PEX7 206 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 OPN5Q6U736 354 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 ZNF547Q8IVP9 402 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 C4orf45Q96LM5 186 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 AMELYQ99218 206 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 RCL1Q9Y2P8 373 aaKnown RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 A0A087WWC5 75 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 HSD17B6O14756 317 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 CA11O75493 328 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 GALTP07902 379 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 CSNK1G2P78368 415 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 RAB35Q15286 201 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 ZNF260Q3ZCT1 412 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 HIKESHIQ53FT3 197 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 ALG10BQ5I7T1 473 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 PHF19Q5T6S3 580 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 NCR3LG1Q68D85 454 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 TMEM225Q6GV28 225 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 TMEM183AQ8IXX5 376 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 DIRC2Q96SL1 478 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 FOXD3Q9UJU5 478 aaPredicted RBP16.66■□□□□ 0.26
PTPA-223ENST00000452489 PITPNC1Q9UKF7 332 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 ZNF780BQ9Y6R6 833 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 COLEC10Q9Y6Z7 277 aa16.66■□□□□ 0.26
PTPA-223ENST00000452489 RPLP1P05386 114 aaKnown RBP16.65■□□□□ 0.26
PTPA-223ENST00000452489 METTL15P1P0C7V9 234 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 LMO1P25800 156 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 CCL20P78556 96 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 TMEM35AQ53FP2 167 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 SAPCD1Q5SSQ6 148 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 DPY19L4Q7Z388 723 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 PEG10Q86TG7 708 aaKnown RBP16.65■□□□□ 0.26
PTPA-223ENST00000452489 OR6N2Q8NGY6 317 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 H7C1C5 153 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 RPS4Y1P22090 263 aaKnown RBP16.65■□□□□ 0.26
PTPA-223ENST00000452489 GNALP38405 381 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 RGS19P49795 217 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 LCN6P62502 163 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 POMZP3Q6PJE2 187 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 CDC20BQ86Y33 519 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 EXD3Q8N9H8 876 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 PLPP5Q8NEB5 264 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 SYT3Q9BQG1 590 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 WDR76Q9H967 626 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 LANCL2Q9NS86 450 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 SEMA5BQ9P283 1151 aa16.65■□□□□ 0.26
PTPA-223ENST00000452489 LDLRAD4O15165 306 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 PPM1FP49593 454 aaPredicted RBP16.64■□□□□ 0.25
PTPA-223ENST00000452489 DCST2Q5T1A1 773 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 BTNL3Q6UXE8 466 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 OR4N5Q8IXE1 308 aa16.64■□□□□ 0.25
PTPA-223ENST00000452489 SLC35G3Q8N808 338 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms