RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 AMIGO2Q86SJ2 522 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 PEG10Q86TG7 708 aaKnown RBP17.15■□□□□ 0.34
GTF3A-202ENST00000419181 OR2AE1Q8NHA4 323 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 LRTOMTQ8WZ04 291 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 MEGF10Q96KG7 1140 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 MDFIQ99750 246 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 REPIN1Q9BWE0 567 aaKnown RBP17.15■□□□□ 0.34
GTF3A-202ENST00000419181 TOR3AQ9H497 397 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 GCM1Q9NP62 436 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 KRT84Q9NSB2 600 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 TMEM100Q9NV29 134 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 NPTNQ9Y639 398 aa17.15■□□□□ 0.34
GTF3A-202ENST00000419181 SELENOFO60613 162 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 MITFO75030 526 aaPredicted RBP17.14■□□□□ 0.33
GTF3A-202ENST00000419181 SLC2A1P11166 492 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 HNF1AP20823 631 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 OPRL1P41146 370 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 MMP16P51512 607 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 SNAPC1Q16533 368 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 GLCCI1Q86VQ1 547 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 OTOSQ8NHW6 89 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 RAB39BQ96DA2 213 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 SIGLEC11Q96RL6 698 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 LPAR2Q9HBW0 351 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 TVP23BQ9NYZ1 205 aa17.14■□□□□ 0.33
GTF3A-202ENST00000419181 TMEFF2Q9UIK5 374 aaPredicted RBP17.14■□□□□ 0.33
GTF3A-202ENST00000419181 ISPDA4D126 451 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 CD300LBA8K4G0 201 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 F5H5P2 479 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 IGHV2-70P01814 119 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 HLA-DPB1P04440 258 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 HSD11B1P28845 292 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 CX3CR1P49238 355 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 SRP9P49458 86 aaKnown RBP17.13■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF454Q8N9F8 522 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 OR51F2Q8NH61 342 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 SPRYD4Q8WW59 207 aaPredicted RBP17.13■□□□□ 0.33
GTF3A-202ENST00000419181 TMEM186Q96B77 213 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 GAL3ST1Q99999 423 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 HIF1ANQ9NWT6 349 aa17.13■□□□□ 0.33
GTF3A-202ENST00000419181 XRCC2O43543 280 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 LYNP07948 512 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 SRD5A1P18405 259 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 PCMT1P22061 227 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 EPHA2P29317 976 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 NAA10P41227 235 aaPredicted RBP17.12■□□□□ 0.33
GTF3A-202ENST00000419181 ACTR3P61158 418 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 RPS7P62081 194 aaKnown RBP17.12■□□□□ 0.33
GTF3A-202ENST00000419181 APOFQ13790 326 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 PRSS45Q7RTY3 260 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 SPSB4Q96A44 273 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 CENPNQ96H22 339 aaPredicted RBP17.12■□□□□ 0.33
GTF3A-202ENST00000419181 PRRG3Q9BZD7 231 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 OPA3Q9H6K4 179 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 COL6A5A8TX70 2615 aa17.12■□□□□ 0.33
GTF3A-202ENST00000419181 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 ZAR1LA6NP61 321 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 TMEM178BH3BS89 294 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 IFNL4K9M1U5 179 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 PRKYO43930 277 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 APOC1P02654 83 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 ANPEPP15144 967 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 GATA4P43694 442 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 BTG1P62324 171 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 MAB21L1Q13394 359 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 ZMYND11Q15326 602 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 SLX4IPQ5VYV7 408 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 CELF2-AS1Q8N7Q2 184 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 PYDC1Q8WXC3 89 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 SLC22A4Q9H015 551 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 SEMA6AQ9H2E6 1030 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 ENOPH1Q9UHY7 261 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 OAZ3Q9UMX2 235 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 KLHDC2Q9Y2U9 406 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 N6AMT1Q9Y5N5 214 aa17.11■□□□□ 0.33
GTF3A-202ENST00000419181 FBN1P35555 2871 aaKnown RBP17.1■□□□□ 0.33
GTF3A-202ENST00000419181 TRAV20A0A0B4J274 112 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 IGHV3-64DA0A0J9YX35 117 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 GGT3PA6NGU5 568 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 ANXA2P07355 339 aaKnown RBP17.1■□□□□ 0.33
GTF3A-202ENST00000419181 H2BFMP0C1H6 154 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 SBK2P0C263 348 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 CA6P23280 308 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 CD200P41217 278 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF121P58317 390 aaPredicted RBP17.1■□□□□ 0.33
GTF3A-202ENST00000419181 EFNB1P98172 346 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 TMEM155Q4W5P6 130 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 C12orf73Q69YU5 71 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 OR52H1Q8NGJ2 320 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 ZNF420Q8TAQ5 688 aaPredicted RBP17.1■□□□□ 0.33
GTF3A-202ENST00000419181 THEM6Q8WUY1 208 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 TEAD3Q99594 435 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 CIB1Q99828 191 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 SP140LQ9H930 580 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 UBAP1Q9NZ09 502 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 DNAJC27Q9NZQ0 273 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 MRPL15Q9P015 296 aaKnown RBP17.1■□□□□ 0.33
GTF3A-202ENST00000419181 WNK2Q9Y3S1 2297 aa17.1■□□□□ 0.33
GTF3A-202ENST00000419181 M0R129 80 aa17.09■□□□□ 0.33
GTF3A-202ENST00000419181 TBX1O43435 398 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms