RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TUSC1Q2TAM9 212 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 PLXDC2Q6UX71 529 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 CFAP77Q6ZQR2 320 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 SPICQ8N5J4 248 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 SCARB1Q8WTV0 552 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 SPRYD4Q8WW59 207 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-202ENST00000324340 GATAD2BQ8WXI9 593 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 NSMAFQ92636 917 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ISG20L2Q9H9L3 353 aaKnown RBP11.24□□□□□ -0.61
DDX39A-202ENST00000324340 CALHM2Q9HA72 323 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 COMMD3Q9UBI1 195 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 KCNG2Q9UJ96 466 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
DDX39A-202ENST00000324340 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 DHHO43323 396 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 SS18L1O75177 396 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 UPK3AO75631 287 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 MPZL1O95297 269 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 MT-ND5P03915 603 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 TCRBP04435 133 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ADAM8P78325 824 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 PITPNAQ00169 270 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 MXD1Q05195 221 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 EGR3Q06889 387 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 OPCMLQ14982 345 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 GUSBP1Q15486 140 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 DPY19L4Q7Z388 723 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 MCEMP1Q8IX19 187 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 DTX3Q8N9I9 347 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 BVESQ8NE79 360 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 OR6N2Q8NGY6 317 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ASB17Q8WXJ9 295 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 C11orf40Q8WZ69 217 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 WNT2BQ93097 391 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF775Q96BV0 537 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 GMPPAQ96IJ6 420 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 FOXN4Q96NZ1 517 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 THAP7Q9BT49 309 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 HDHD2Q9H0R4 259 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 ABCG5Q9H222 651 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 BABAM2Q9NXR7 383 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
DDX39A-202ENST00000324340 DMXL2Q8TDJ6 3036 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 CD8B2A6NJW9 211 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 PRR32B1ATL7 298 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 RPL36A-HNRNPH2H7BZ11 118 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 TMEM127O75204 238 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 IFNA4P05014 189 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-202ENST00000324340 SFTPCP11686 197 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 GABRA1P14867 456 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 ZNF823P16415 610 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 NPR2P20594 1047 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 AGTR1P30556 359 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 PTGER4P35408 488 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 OR12D2P58182 307 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
DDX39A-202ENST00000324340 ROM1Q03395 351 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 P2RY14Q15391 338 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 MEP1BQ16820 701 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 BCL2L15Q5TBC7 163 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 NSUN5P2Q63ZY6 315 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 TPRA1Q86W33 373 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 GPR137CQ8N3F9 429 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
DDX39A-202ENST00000324340 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 SNX33Q8WV41 574 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 NABP1Q96AH0 204 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 C4orf36Q96KX1 117 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 CMTM3Q96MX0 182 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 TRIB1Q96RU8 372 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 WACQ9BTA9 647 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 SLCO5A1Q9H2Y9 848 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 LAMP5Q9UJQ1 280 aa11.22□□□□□ -0.61
DDX39A-202ENST00000324340 ALPK2Q86TB3 2170 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 HSPB2A8KAH6 182 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 F8W036 122 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 CTDSPLO15194 276 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 GSTZ1O43708 216 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-202ENST00000324340 WDR1O75083 606 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 ABHD16AO95870 558 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 SPARCP09486 303 aa11.21□□□□□ -0.61
DDX39A-202ENST00000324340 BTCP35070 178 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms