RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SLC36A2Q495M3 483 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 CEP78Q5JTW2 689 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 GLT8D1Q68CQ7 371 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PGAP1Q75T13 922 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 DOLPP1Q86YN1 238 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 SLC22A24Q8N4F4 322 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF808Q8N4W9 903 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 OR13C5Q8NGS8 318 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 WNT2BQ93097 391 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 BOD1Q96IK1 185 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 NEK6Q9HC98 313 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF275Q9NSD4 429 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 SPRR3Q9UBC9 169 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 CAMK2AQ9UQM7 478 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 KLF2Q9Y5W3 355 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-201ENST00000238688 V9GYH0 126 aa11.56□□□□□ -0.56
SLIRP-201ENST00000238688 PDZD2O15018 2839 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 J3QRK9 145 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 RER1O15258 196 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 SYT7O43581 403 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MTRF1O75570 445 aaKnown RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 TTRP02766 147 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 ACSM4P0C7M7 580 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 ARR3P36575 388 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 OR3A2P47893 321 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 CX3CR1P49238 355 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MRPS10P82664 201 aaKnown RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 PITPNAQ00169 270 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 TGFBR3Q03167 851 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MFGE8Q08431 387 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 KRTAP27-1Q3LI81 207 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 UBE2NLQ5JXB2 153 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 FAM27D1Q5T7N8 215 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 LUZP2Q86TE4 346 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 LRRTM1Q86UE6 522 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 NR2C2APQ86WQ0 139 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 SERPINA12Q8IW75 414 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF100Q8IYN0 542 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 PLPP7Q8NBV4 271 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 OR5D14Q8NGL3 314 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 OR13C3Q8NGS6 347 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 NANOS1Q8WY41 292 aaKnown RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 DMRTA2Q96SC8 542 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 UQCC2Q9BRT2 126 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 SRRQ9GZT4 340 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MIXL1Q9H2W2 232 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MOV10Q9HCE1 1003 aaKnown RBP11.55□□□□□ -0.56
SLIRP-201ENST00000238688 PLEK2Q9NYT0 353 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 COMMD3Q9UBI1 195 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 UPB1Q9UBR1 384 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 DAPK2Q9UIK4 370 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 FBXL3Q9UKT7 428 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 MEMO1Q9Y316 297 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 LIPGQ9Y5X9 500 aa11.55□□□□□ -0.56
SLIRP-201ENST00000238688 DOCK7Q96N67 2140 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 DCHS2Q6V1P9 2916 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 A0A0A6YYH2 397 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 A6NJ64 397 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 J3QW42 95 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 M0R135 149 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 SULT1B1O43704 296 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 SYNGR3O43761 229 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 IGLV3-1P01715 115 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 HLA-DQB1P01920 261 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ATF1P18846 271 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 CRYGSP22914 178 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 MPGP29372 298 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 AGTR1P30556 359 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 MNDAP41218 407 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF121P58317 390 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-201ENST00000238688 SCN1BQ07699 218 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 PYHIN1Q6K0P9 492 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 CNIH2Q6PI25 160 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 FAM131AQ6UXB0 335 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF813Q6ZN06 617 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 SLC16A14Q7RTX9 510 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 P4HA3Q7Z4N8 544 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 TUSC5Q8IXB3 177 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 OR6M1Q8NGM8 313 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 OR1F12Q8NHA8 337 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF671Q8TAW3 534 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
SLIRP-201ENST00000238688 DEDD2Q8WXF8 326 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 PP6455Q8WZ26 134 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 MARVELD3Q96A59 401 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 PTX4Q96A99 478 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 CPNE2Q96FN4 548 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ZNF799Q96GE5 643 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ALKBH3Q96Q83 286 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-201ENST00000238688 OR10A2Q9H208 303 aa11.54□□□□□ -0.56
SLIRP-201ENST00000238688 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms