RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CALCRP30988 508 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 GSK3AP49840 483 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 GK2Q14410 553 aaPredicted RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 SHBQ15464 509 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 RNASE10Q5GAN6 216 aaKnown RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 ATPAF1Q5TC12 328 aaPredicted RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 DCAF12L2Q5VW00 463 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 GSG1LQ6UXU4 331 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 ZNF574Q6ZN55 896 aaPredicted RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 RHOUQ7L0Q8 258 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 TMED4Q7Z7H5 227 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 TRAPPC6BQ86SZ2 158 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 FJX1Q86VR8 437 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 WDFY1Q8IWB7 410 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 SLC38A9Q8NBW4 561 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 ACBD4Q8NC06 268 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 OR1J2Q8NGS2 313 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 SLC25A43Q8WUT9 341 aaPredicted RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 RBPMSQ93062 196 aaKnown RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 WDR89Q96FK6 387 aaPredicted RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 GAL3ST1Q99999 423 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 CRB3Q9BUF7 120 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
GPC3-204ENST00000631057 CNTD2Q9H8S5 307 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 B3GAT1Q9P2W7 334 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 KLK13Q9UKR3 277 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 SLC5A6Q9Y289 635 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 PLEKHA6Q9Y2H5 1048 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 SESN1Q9Y6P5 492 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 MED12Q93074 2177 aa7.17□□□□□ -1.26
GPC3-204ENST00000631057 ZSCAN5BA6NJL1 495 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 SHISA8B8ZZ34 492 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 RAB27BO00194 218 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TRAF3IP2O43734 574 aaPredicted RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 EFNA2O43921 213 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TIAF1O95411 115 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 CD8AP01732 235 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 PGA4P0DJD7 388 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 PGA3P0DJD8 388 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 NR2C1P13056 603 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF28P17035 718 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TBPP20226 339 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 CD34P28906 385 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 EPHA8P29322 1005 aaPredicted RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 PTGDSP41222 190 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 EIF1P41567 113 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 CXCL12P48061 93 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 CLDN6P56747 220 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 UBE2MP61081 183 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 CCL7P80098 99 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OC90Q02509 493 aaPredicted RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 SRSF4Q08170 494 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 FGL1Q08830 312 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 BAMBIQ13145 260 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TAF13Q15543 124 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF239Q16600 458 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 MOGAT2Q3SYC2 334 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF260Q3ZCT1 412 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 FAM69BQ5VUD6 431 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR10K2Q6IF99 312 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 LIN54Q6MZP7 749 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF529Q6P280 563 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 RFPL4BQ6ZWI9 263 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR2W3Q7Z3T1 314 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TMPRSS9Q7Z410 1059 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 SLC51BQ86UW2 128 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZDHHC22Q8N966 263 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 DTWD2Q8NBA8 298 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 CHST4Q8NCG5 386 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 STEAP2Q8NFT2 490 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR2M3Q8NG83 312 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR10G3Q8NGC4 313 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR4K17Q8NGC6 315 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR52N4Q8NGI2 321 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR5M8Q8NGP6 311 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 OR6X1Q8NH79 312 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 POC1BQ8TC44 478 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 PCNPQ8WW12 178 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 CLDN23Q96B33 292 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ADAT3Q96EY9 351 aaPredicted RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 OXGR1Q96P68 337 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 SLC6A7Q99884 636 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 EMC6Q9BV81 110 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 MFFQ9GZY8 342 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 SLC26A1Q9H2B4 701 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 IFT46Q9NQC8 304 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 ZNF224Q9NZL3 707 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 MYOTQ9UBF9 498 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 FARSAQ9Y285 508 aaKnown RBP7.16□□□□□ -1.26
GPC3-204ENST00000631057 B3GALT1Q9Y5Z6 326 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 LHFPL6Q9Y693 200 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 A0A0D9SG52 128 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 IGHV5-10-1A0A0J9YXX1 117 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 A0A1B0GTI1 187 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 LOC102725191A0A1B0GVB3 256 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 A0A1B0GW55 424 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 K7ESF4 209 aa7.16□□□□□ -1.26
GPC3-204ENST00000631057 TP53I11O14683 189 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms