RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 GCH1P30793 250 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF133P52736 654 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 CRISP1P54107 249 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 ESRRGP62508 458 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 PSG4Q00888 419 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 CD47Q08722 323 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 KRR1Q13601 381 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 LRRC36Q1X8D7 754 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 ARMC4Q5T2S8 1044 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 LPCAT4Q643R3 524 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC27A4Q6P1M0 643 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 RFPL4BQ6ZWI9 263 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 PARP8Q8N3A8 854 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 OR8D4Q8NGM9 314 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 RBP7Q96R05 134 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 SLITRK2Q9H156 845 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 RIBC2Q9H4K1 309 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 PATZ1Q9HBE1 687 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 USE1Q9NZ43 259 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 IGHV3OR16-10A0A075B7F0 116 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 A0A0G2JK05 382 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 PLSCR5A0PG75 271 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 CENPBD1B2RD01 187 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 SLC2A10O95528 541 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 CD55P08174 381 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 IGHV4-38-2P0DP08 117 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 OMGP23515 440 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 CD80P33681 288 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 ZNF84P51523 738 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 RIPK1Q13546 671 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 GINS1Q14691 196 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 SLC35F1Q5T1Q4 408 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 C10orf128Q5T292 105 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 FAM122BQ7Z309 247 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 LRRC28Q86X40 367 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 NOXO1Q8NFA2 376 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 SLC25A28Q96A46 364 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 RASD2Q96D21 266 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 ALG12Q9BV10 488 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 VCXQ9H320 206 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 C8orf4Q9NR00 106 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 TMEM106BQ9NUM4 274 aa13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 NKX1-2Q9UD57 310 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-215ENST00000597649 BHLHE40O14503 412 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 ATP6V1G2O95670 118 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 TXNDC12O95881 172 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 RENP00797 406 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 IFNGP01579 166 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 HMGN1P05114 100 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 ALPLP05186 524 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 GRK5P34947 590 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 MRPS34P82930 218 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 PAX8Q06710 450 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 CDK5R2Q13319 367 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 ADCK1Q86TW2 530 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 LNX2Q8N448 690 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 IQCF1Q8N6M8 205 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 OR52E2Q8NGJ4 325 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 OR4Q3Q8NH05 313 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 OR4K13Q8NH42 304 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 HDAC2Q92769 488 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 PLEKHA8Q96JA3 519 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 SLC29A1Q99808 456 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 WNT5BQ9H1J7 359 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 CCNB1IP1Q9NPC3 277 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 CYSLTR2Q9NS75 346 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 EIF3KQ9UBQ5 218 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 ZDHHC8Q9ULC8 765 aa13.82□□□□□ -0.2
SHKBP1-215ENST00000597649 RIIAD1A6NNX1 92 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 F5H0A9 414 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 H7C1C5 153 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 AHCYL1O43865 530 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 GPANK1O95872 356 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 HIST1H1CP16403 213 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PEX2P28328 305 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 LIPAP38571 399 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 GDI2P50395 445 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PPP1CBP62140 327 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 LCN6P62502 163 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 TNFAIP6P98066 277 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PAX2Q02962 417 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 FMODQ06828 376 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PSG7Q13046 419 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PTGES3Q15185 160 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 ZMYND11Q15326 602 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 SGCAQ16586 387 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 OCLNQ16625 522 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 ZIK1Q3SY52 487 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 MESTQ5EB52 335 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PACRGLQ8N7B6 248 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 ZNF283Q8N7M2 679 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 ABHD4Q8TB40 342 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 TMIGD2Q96BF3 282 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 SIGLEC11Q96RL6 698 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 PRRG3Q9BZD7 231 aa13.81□□□□□ -0.2
SHKBP1-215ENST00000597649 MS4A7Q9GZW8 240 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms