RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 TMEM100Q9NV29 134 aa13.61□□□□□ -0.23
MBD3-206ENST00000589901 MIOXQ9UGB7 285 aa13.61□□□□□ -0.23
MBD3-206ENST00000589901 TRAV40A0A0B4J280 105 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 MDFIC2A0A1B0GVS7 189 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 A0A1B0GWJ7 208 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 LRRC30A6NM36 301 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 F5H5K5 113 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 PLATP00750 562 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 ACSM4P0C7M7 580 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 PPIAL4GP0DN37 164 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 FPR3P25089 353 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 IFNGR2P38484 337 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 HOXA4Q00056 320 aaPredicted RBP13.6□□□□□ -0.23
MBD3-206ENST00000589901 GK2Q14410 553 aaPredicted RBP13.6□□□□□ -0.23
MBD3-206ENST00000589901 ZNF181Q2M3W8 571 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 KRTAP27-1Q3LI81 207 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 SLC18B1Q6NT16 456 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 PGM2L1Q6PCE3 622 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 LRRN1Q6UXK5 716 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 C9orf139Q6ZV77 190 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 NAA40Q86UY6 237 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 ARHGAP24Q8N264 748 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 SLC26A10Q8NG04 563 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 OR4K13Q8NH42 304 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 FANK1Q8TC84 345 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 SLC25A28Q96A46 364 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 UPRTQ96BW1 309 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
MBD3-206ENST00000589901 PYURFQ96I23 114 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 PITX2Q99697 317 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 OR52D1Q9H346 318 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 ZNF696Q9H7X3 374 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 UNKLQ9H9P5 680 aaKnown RBP13.6□□□□□ -0.23
MBD3-206ENST00000589901 ARL8BQ9NVJ2 186 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 V9GYQ6 96 aa13.6□□□□□ -0.23
MBD3-206ENST00000589901 CLDN34H7C241 214 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
MBD3-206ENST00000589901 CALB2P22676 271 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 CPT2P23786 658 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 MTNR1AP48039 350 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 PITPNBP48739 271 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 MAB21L1Q13394 359 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 RFX4Q33E94 735 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 LYPD2Q6UXB3 125 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 C19orf18Q8NEA5 215 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 OR8B3Q8NGG8 313 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 PLEKHA8Q96JA3 519 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 OR8B2Q96RD0 313 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 FN3KQ9H479 309 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
MBD3-206ENST00000589901 TMCC3Q9ULS5 477 aa13.59□□□□□ -0.23
MBD3-206ENST00000589901 KIR2DS1A0A191URI9 304 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 B2RBV5 119 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 ARPC3O15145 178 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 FSTL3O95633 263 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 RENP00797 406 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 FABP3P05413 133 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 SLC6A6P31641 620 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 GATA4P43694 442 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
MBD3-206ENST00000589901 PRAMEF6Q5VXH4 476 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 NLRC3Q7RTR2 1065 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 SLCO4A1Q96BD0 722 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 ATF6BQ99941 703 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 NUDT16L1Q9BRJ7 211 aaKnown RBP13.58□□□□□ -0.24
MBD3-206ENST00000589901 IFT27Q9BW83 186 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 CDADC1Q9BWV3 514 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
MBD3-206ENST00000589901 UFSP2Q9NUQ7 469 aa13.58□□□□□ -0.24
MBD3-206ENST00000589901 OR6C68A6NDL8 312 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 ARPC2O15144 300 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 FAM20BO75063 409 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 GADD45GO95257 159 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 LCATP04180 440 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 SEMG1P04279 462 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 GGT2P36268 569 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 IL13RA1P78552 427 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 SPIBQ01892 262 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 MPPED2Q15777 294 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 WDR25Q64LD2 544 aaPredicted RBP13.57□□□□□ -0.24
MBD3-206ENST00000589901 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 PGAP1Q75T13 922 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 ZBTB46Q86UZ6 589 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 FITM2Q8N6M3 262 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 SDR9C7Q8NEX9 313 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 Q8TCH9 128 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 MUC13Q9H3R2 512 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 CLN8Q9UBY8 286 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 CYB5R1Q9UHQ9 305 aa13.57□□□□□ -0.24
MBD3-206ENST00000589901 C22orf46C9J442 243 aa13.56□□□□□ -0.24
MBD3-206ENST00000589901 HOXA3O43365 443 aaPredicted RBP13.56□□□□□ -0.24
MBD3-206ENST00000589901 OR10H3O60404 316 aa13.56□□□□□ -0.24
MBD3-206ENST00000589901 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms