RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ACSM4P0C7M7 580 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SELEP16581 610 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 PRKACGP22612 351 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 POU1F1P28069 291 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC6A9P48067 706 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 TPTEP56180 551 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SCGB2A2Q13296 93 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 CRMP1Q14194 572 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 RSPO1Q2MKA7 263 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 LYPD4Q6UWN0 246 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 NAA40Q86UY6 237 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 LNX2Q8N448 690 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 KLHL36Q8N4N3 616 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SPICQ8N5J4 248 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 OR2T33Q8NG76 320 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 OR13G1Q8NGZ3 307 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF420Q8TAQ5 688 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SPTSSAQ969W0 71 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 MAP6Q96JE9 813 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 C1QTNF5Q9BXJ0 243 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 G6PC2Q9NQR9 355 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 KCNG2Q9UJ96 466 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 F5H5P2 479 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 H3BN98 237 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 M0R135 149 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 TIPRLO75663 272 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 ATP5HO75947 161 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 IFNGP01579 166 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 HLA-DPB1P04440 258 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 CLUP10909 449 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 FMO3P31513 532 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 SRP9P49458 86 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 RASSF2P50749 326 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 MMP16P51512 607 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 BTG1P62324 171 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 ATRQ13535 2644 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 GK3PQ14409 553 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 GK2Q14410 553 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 TAF13Q15543 124 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 CD300LDQ6UXZ3 194 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 PGAP1Q75T13 922 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 MRPL21Q7Z2W9 205 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 DCXRQ7Z4W1 244 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 TEX29Q8N6K0 151 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 PAPD5Q8NDF8 572 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 OR6K6Q8NGW6 343 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 TEX47Q8TBZ9 253 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 SPRYD4Q8WW59 207 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 OTULINQ96BN8 352 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF799Q96GE5 643 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 MEGF10Q96KG7 1140 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 COPS4Q9BT78 406 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 YY1AP1Q9H869 796 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 PNRC2Q9NPJ4 139 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 TMEM100Q9NV29 134 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 DNAJB9Q9UBS3 223 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 BAIAP2Q9UQB8 552 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 N6AMT1Q9Y5N5 214 aa10.71□□□□□ -0.69
NPLOC4-213ENST00000573519 RIIAD1A6NNX1 92 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 IQCF6A8MYZ5 107 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 MLNRO43193 412 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 FOXH1O75593 365 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF205O95201 554 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 CYB5R3P00387 301 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 AVPP01185 164 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 PSKH1P11801 424 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF3P17036 446 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 SPI1P17947 270 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ADRA2CP18825 462 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ENTPD1P49961 510 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ZMYND11Q15326 602 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 KRTAP27-1Q3LI81 207 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 COLCA1Q6ZS62 124 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 C1orf229Q6ZS94 237 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 SPATC1Q76KD6 591 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 MOGAT3Q86VF5 341 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF511Q8NB15 262 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 OR10S1Q8NGN2 331 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 SIGLEC11Q96RL6 698 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 SLC30A2Q9BRI3 323 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 TMPRSS13Q9BYE2 586 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 C7orf69Q9H7B7 122 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 MED20Q9H944 212 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 NTN4Q9HB63 628 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 CENPMQ9NSP4 180 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
NPLOC4-213ENST00000573519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.77e-20■■■■□ 19.6
NPLOC4-213ENST00000573519 TANC2Q9HCD6 1990 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 COL6A5A8TX70 2615 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 ARRDC5A6NEK1 342 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 FAM183AA6NL82 134 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 LRRC30A6NM36 301 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 TMEM178BH3BS89 294 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 J3QLI3 93 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 ZNF593O00488 134 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 HOXB6P17509 224 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 EPHA1P21709 976 aa10.69□□□□□ -0.7
NPLOC4-213ENST00000573519 GATA3P23771 443 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms