RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MTRF1O75570 445 aaKnown RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 SERPINA2P20848 420 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 INSM1Q01101 510 aaPredicted RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 MPPED2Q15777 294 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 OR52N5Q8NH56 324 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RNF128Q8TEB7 428 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ZNF524Q96C55 264 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 WBP1Q96G27 269 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 NECAB3Q96P71 396 aaPredicted RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 MTIF3Q9H2K0 278 aaKnown RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ZNF106Q9H2Y7 1883 aaKnown RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 WISP1O95388 367 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 DHODHQ02127 395 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 TOMM20Q15388 145 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 CHRFAM7AQ494W8 412 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 TMEM244Q5VVB8 128 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 OR5AP2Q8NGF4 316 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 ASB17Q8WXJ9 295 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 PDE7BQ9NP56 450 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 KLRF1Q9NZS2 232 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 NDRG3Q9UGV2 375 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 GDF2Q9UK05 429 aaPredicted RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 MSGN1A6NI15 193 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 PRSS44E7EML9 344 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 K7EQS6 105 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 LINC01565O15544 149 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 MYF5P13349 255 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 GABRR1P24046 479 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 CDAP32320 146 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 GPR3P46089 330 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 BIDP55957 195 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 RAB32Q13637 225 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 RPL7L1Q6DKI1 246 aaKnown RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 RXFP4Q8TDU9 374 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 THRSPQ92748 146 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 MCHR2Q969V1 340 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 CDC6Q99741 560 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 ZFP57Q9NU63 452 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 DZANK1Q9NVP4 752 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 B3GALT1Q9Y5Z6 326 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 ZNF354AO60765 605 aaPredicted RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 TSPAN15O95858 294 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 GLRA1P23415 457 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 CRABP1P29762 137 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 ASCL1P50553 236 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 MOB3CQ70IA8 216 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 SLC43A2Q8N370 569 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 OR5D14Q8NGL3 314 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 CYYR1Q96J86 154 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
VPS52-218ENST00000482399 MRPL22Q9NWU5 206 aaKnown RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 MRPS28Q9Y2Q9 187 aaKnown RBP11.38□□□□□ -0.59
VPS52-218ENST00000482399 TRBV5-7A0A0A0MS05 114 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 SULT2B1O00204 365 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 FOXS1O43638 330 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 APOC1P02654 83 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 SKP2Q13309 424 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 IAH1Q2TAA2 248 aaPredicted RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 EIF5AL1Q6IS14 154 aaKnown RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 DNM1P34Q6PK57 102 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 SEMA6DQ8NFY4 1073 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 ARL5BQ96KC2 179 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 UQCC1Q9NVA1 299 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 RAB22AQ9UL26 194 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 KCNK7Q9Y2U2 307 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 PIAS3Q9Y6X2 628 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 RHPN2P1A8MT19 583 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 SOCS1O15524 211 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 CRHP06850 196 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 ASAH2BP0C7U1 165 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 TMEM240Q5SV17 173 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 HSD17B11Q8NBQ5 300 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 OR1M1Q8NGA1 313 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 KLHDC7BQ96G42 594 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 ZNF700Q9H0M5 742 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 PRMT8Q9NR22 394 aaPredicted RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 OR5AC2Q9NZP5 309 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 KNTC1P50748 2209 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 SFTA3P0C7M3 94 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 RSPO4Q2I0M5 234 aaPredicted RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 LPCAT3Q6P1A2 487 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 Q6ZRG5 221 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 NAA40Q86UY6 237 aa11.37□□□□□ -0.59
VPS52-218ENST00000482399 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 C14orf166Q9Y224 244 aaKnown RBP11.37□□□□□ -0.59
VPS52-218ENST00000482399 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 NSA2O95478 260 aaKnown RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 ADH6P28332 368 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 MEOX2P50222 304 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SNU13P55769 128 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms