RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 TMED8Q6PL24 325 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 CLEC2AQ6UVW9 174 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ACOT7LQ6ZUV0 252 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 NIPA1Q7RTP0 329 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SCD5Q86SK9 330 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 KIAA1328Q86T90 577 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 IQCA1Q86XH1 822 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 MED12LQ86YW9 2145 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 PGAM4Q8N0Y7 254 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 LPCAT1Q8NF37 534 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ANKRD20A12PQ8NF67 263 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OR11G2Q8NGC1 345 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 OR56A4Q8NGH8 313 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 RAB3IL1Q8TBN0 382 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ST7LQ8TDW4 575 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 C10orf105Q8TEF2 133 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ZFP90Q8TF47 636 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ESR2Q92731 530 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 N4BP2L2Q92802 583 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SNX21Q969T3 373 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 LRRC58Q96CX6 371 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 TMA16Q96EY4 203 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 SDSLQ96GA7 329 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 FAHD2AQ96GK7 314 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF514Q96K75 400 aaPredicted RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 KLHDC3Q9BQ90 382 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ACBD6Q9BR61 282 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 API5Q9BZZ5 524 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ROGDIQ9GZN7 287 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 GRPEL1Q9HAV7 217 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 DYRK4Q9NR20 520 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 UTP6Q9NYH9 597 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 FAM153AQ9UHL3 310 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 XPO7Q9UIA9 1087 aaKnown RBP0.69□□□□□ -2.3
LRCH3-209ENST00000452660 ALG6Q9Y672 507 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 S4R3C0 116 aa0.69□□□□□ -2.3
LRCH3-209ENST00000452660 TNCP24821 2201 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A0A0D9SFI3 127 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A0A0G2JMM0 328 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A0A1W2PP18 115 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A0A1W2PPB8 328 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A0A1W2PRS3 328 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SLC5A10A0PJK1 596 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC169A6NNP5 214 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 WASHC1A8K0Z3 465 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 A8MUU9 505 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 KIR3DP1A8MWS1 328 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 C9J4A7 227 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 ZNF878C9JN71 531 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SLC16A4O15374 487 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CLOCKO15516 846 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 VEGFDO43915 354 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 HUS1O60921 280 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 ENTPD5O75356 428 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 STX11O75558 287 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 TM7SF2O76062 418 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 IGLV2-23P01705 113 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 MCF2P10911 925 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 COX6A1P12074 109 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SLC25A16P16260 332 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 NELFEP18615 380 aaKnown RBP0.68□□□□□ -2.3
LRCH3-209ENST00000452660 TSPAN8P19075 237 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 PRTN3P24158 256 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CD80P33681 288 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SLC26A3P40879 764 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 PTGDSP41222 190 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 HTR5AP47898 357 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 ACOT2P49753 483 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SELENOTP62341 195 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SMARCB1Q12824 385 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 BAMBIQ13145 260 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 SLC9A3R2Q15599 337 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 ZNHIT3Q15649 155 aaPredicted RBP0.68□□□□□ -2.3
LRCH3-209ENST00000452660 IMMTQ16891 758 aaKnown RBP0.68□□□□□ -2.3
LRCH3-209ENST00000452660 HFEQ30201 348 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 PGGHGQ32M88 737 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 NSUN5P1Q3KNT7 163 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 KRTAP20-1Q3LI63 56 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 FBXL19-AS1Q494R0 122 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC184Q52MB2 194 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 FAM133BQ5BKY9 247 aaKnown RBP0.68□□□□□ -2.3
LRCH3-209ENST00000452660 ARMC3Q5W041 872 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 RAET1GQ6H3X3 334 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CYS1Q717R9 158 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CRLF3Q8IUI8 442 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 OSR2Q8N2R0 312 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 LRRC52Q8N7C0 313 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 DENND6BQ8NEG7 585 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 OR2Y1Q8NGV0 311 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 PSMA8Q8TAA3 256 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 EXOC6Q8TAG9 804 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC110Q8TBZ0 833 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 DTX3LQ8TDB6 740 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CXorf40AQ8TE69 158 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 FCRL1Q96LA6 429 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 CCDC43Q96MW1 224 aaKnown RBP0.68□□□□□ -2.3
LRCH3-209ENST00000452660 GSDMAQ96QA5 445 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 MED10Q9BTT4 135 aa0.68□□□□□ -2.3
LRCH3-209ENST00000452660 MED18Q9BUE0 208 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms