RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 HLA-DPB1P04440 258 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 ACSM4P0C7M7 580 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 IGHV4-38-2P0DP08 117 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
CPNE1-219ENST00000440240 IFNGR2P38484 337 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 PITPNBP48739 271 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 GK2Q14410 553 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-219ENST00000440240 SLC18B1Q6NT16 456 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 ZBTB46Q86UZ6 589 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 FAM86B1Q8N7N1 296 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 OR11L1Q8NGX0 322 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 OR4K13Q8NH42 304 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 DACT3Q96B18 629 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-219ENST00000440240 ATF6BQ99941 703 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 IFT27Q9BW83 186 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 RPRD1BQ9NQG5 326 aaKnown RBP17.34■□□□□ 0.37
CPNE1-219ENST00000440240 ZNF446Q9NWS9 450 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 CLN8Q9UBY8 286 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 CYB5R1Q9UHQ9 305 aa17.34■□□□□ 0.37
CPNE1-219ENST00000440240 NOP16Q9Y3C1 178 aaKnown RBP17.34■□□□□ 0.37
CPNE1-219ENST00000440240 PLATP00750 562 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 HLA-DQA2P01906 255 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 LCATP04180 440 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 PMELP40967 661 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 TPTEP56180 551 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 SLC9A3R2Q15599 337 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 CFAP77Q6ZQR2 320 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 DCDC5Q6ZRR9 648 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 PGAP1Q75T13 922 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 LINC00346Q8IVM7 164 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 Q8TCH9 128 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 SPRYD4Q8WW59 207 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-219ENST00000440240 SLCO4A1Q96BD0 722 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 SLC22A4Q9H015 551 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 DOCK11Q5JSL3 2073 aa17.33■□□□□ 0.36
CPNE1-219ENST00000440240 IGHV3OR16-10A0A075B7F0 116 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 OR10H3O60404 316 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 PRDX6P30041 224 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 GGT2P36268 569 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 BPIFB3P59826 476 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 SPIBQ01892 262 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 TRAP1Q12931 704 aaKnown RBP17.32■□□□□ 0.36
CPNE1-219ENST00000440240 MAB21L1Q13394 359 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 FAM201AQ5SY85 155 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 RNF148Q8N7C7 305 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 MCUR1Q96AQ8 359 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 NUDT16L1Q9BRJ7 211 aaKnown RBP17.32■□□□□ 0.36
CPNE1-219ENST00000440240 MYLK2Q9H1R3 596 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 KCNG2Q9UJ96 466 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 TMCC3Q9ULS5 477 aa17.32■□□□□ 0.36
CPNE1-219ENST00000440240 OR6C68A6NDL8 312 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 PHYHO14832 338 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 CD200P41217 278 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 RAD23AP54725 363 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 WDR25Q64LD2 544 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-219ENST00000440240 C16orf87Q6PH81 154 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 NAA40Q86UY6 237 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 SPTSSAQ969W0 71 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 UNKLQ9H9P5 680 aaKnown RBP17.31■□□□□ 0.36
CPNE1-219ENST00000440240 MED4Q9NPJ6 270 aa17.31■□□□□ 0.36
CPNE1-219ENST00000440240 TRAV40A0A0B4J280 105 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 SEMG1P04279 462 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 ZNF823P16415 610 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 KCNJ8Q15842 424 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 MRPL21Q7Z2W9 205 aaKnown RBP17.3■□□□□ 0.36
CPNE1-219ENST00000440240 FITM2Q8N6M3 262 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 GNPDA2Q8TDQ7 276 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 ELAC2Q9BQ52 826 aaKnown RBP17.3■□□□□ 0.36
CPNE1-219ENST00000440240 PNRC2Q9NPJ4 139 aaKnown RBP17.3■□□□□ 0.36
CPNE1-219ENST00000440240 MAGEL2Q9UJ55 1249 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 V9GYQ6 96 aa17.3■□□□□ 0.36
CPNE1-219ENST00000440240 M0R135 149 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 GMDSO60547 372 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 FAM20BO75063 409 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 HSD17B1P14061 328 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 PSMB10P40306 273 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 GSSP48637 474 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 NPY4RP50391 375 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 PRSS12P56730 875 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 TSPAN31Q12999 210 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 OR8G1Q15617 311 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 CLEC12AQ5QGZ9 265 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 CD276Q5ZPR3 534 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 LYPD2Q6UXB3 125 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 PLPP7Q8NBV4 271 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 SDR9C7Q8NEX9 313 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 OR10S1Q8NGN2 331 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 ZDHHC16Q969W1 377 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 ZNF799Q96GE5 643 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 NSRP1Q9H0G5 558 aaKnown RBP17.29■□□□□ 0.36
CPNE1-219ENST00000440240 SLITRK2Q9H156 845 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 PRDM13Q9H4Q3 707 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 FN3KRPQ9HA64 309 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 UFSP2Q9NUQ7 469 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 RNF7Q9UBF6 113 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 SOX21Q9Y651 276 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-219ENST00000440240 TRRAPQ9Y4A5 3859 aa17.29■□□□□ 0.36
CPNE1-219ENST00000440240 CD300LBA8K4G0 201 aa17.28■□□□□ 0.36
CPNE1-219ENST00000440240 ENSAO43768 121 aaKnown RBP17.28■□□□□ 0.36
CPNE1-219ENST00000440240 FABP3P05413 133 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms