RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 RPRD1BQ9NQG5 326 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-203ENST00000437813 DDX28Q9NUL7 540 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-203ENST00000437813 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
TNFRSF1A-203ENST00000437813 SOX21Q9Y651 276 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-203ENST00000437813 IGHV3-64DA0A0J9YX35 117 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 BHLHE40O14503 412 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 TNFRSF13BO14836 293 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 HLA-DPB1P04440 258 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MSX2P35548 267 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PSMB10P40306 273 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CD200P41217 278 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SMIM11AP58511 58 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 TRAP1Q12931 704 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 TSPAN31Q12999 210 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ECH1Q13011 328 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PGAM4Q8N0Y7 254 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ATF6BQ99941 703 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ZMAT3Q9HA38 289 aaKnown RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 KRCC1Q9NPI7 259 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MIOXQ9UGB7 285 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 V9GYQ6 96 aa12.02□□□□□ -0.49
TNFRSF1A-203ENST00000437813 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 TMPRSS2O15393 492 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 WIPF1O43516 503 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 FCN3O75636 299 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RENP00797 406 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 HOXA4Q00056 320 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SPIBQ01892 262 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 KRT72Q14CN4 511 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MPPED2Q15777 294 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PCK2Q16822 640 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 LYPD2Q6UXB3 125 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SDR9C7Q8NEX9 313 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 OR8D4Q8NGM9 314 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RAB40AQ8WXH6 277 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 BTBD10Q9BSF8 475 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MRI1Q9BV20 369 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 IFT27Q9BW83 186 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 TMEM100Q9NV29 134 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 IL20Q9NYY1 176 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 OR5V1Q9UGF6 321 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 KCNG2Q9UJ96 466 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PCDHGB1Q9Y5G3 927 aa12.01□□□□□ -0.49
TNFRSF1A-203ENST00000437813 F5H5K5 113 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 OR10H3O60404 316 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 FAM20BO75063 409 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RPS2P15880 293 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RRM2P31350 389 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 RPS27P42677 84 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 MAGEA2P43356 314 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CENPAP49450 140 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 FOXL1Q12952 345 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SLC9A3R2Q15599 337 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SLC36A3Q495N2 470 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 HSP90B2PQ58FF3 399 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 WDR25Q64LD2 544 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 LYPD4Q6UWN0 246 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 LRRN1Q6UXK5 716 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 JAZF1Q86VZ6 243 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PARP8Q8N3A8 854 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 FITM2Q8N6M3 262 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 OR52E2Q8NGJ4 325 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ERGIC1Q969X5 290 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PITX2Q99697 317 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CDADC1Q9BWV3 514 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 HCAR1Q9BXC0 346 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 NMNAT2Q9BZQ4 307 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 EGLN3Q9H6Z9 239 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ARL8BQ9NVJ2 186 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CTSZQ9UBR2 303 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 LYVE1Q9Y5Y7 322 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CDH10Q9Y6N8 788 aa12□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CD300LBA8K4G0 201 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 C22orf46C9J442 243 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PHYHO14832 338 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 FABP3P05413 133 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PYCR1P32322 319 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 PITPNBP48739 271 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 GNB2P62879 340 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ZNF92Q03936 586 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SPATS1Q496A3 300 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SAMD4BQ5PRF9 694 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SLC35F1Q5T1Q4 408 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 DCDC5Q6ZRR9 648 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 GNPDA2Q8TDQ7 276 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 SLCO4A1Q96BD0 722 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 CDRT15Q96T59 188 aa11.99□□□□□ -0.49
TNFRSF1A-203ENST00000437813 ZNF696Q9H7X3 374 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms