RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IQCF5A8MTL0 148 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 SPRY1O43609 319 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ANXA9O76027 345 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 DIRAS3O95661 229 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PTBP3O95758 552 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 LGI1O95970 557 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RBP1P09455 135 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 COX4I1P13073 169 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 NCF1P14598 390 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PTNP21246 168 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 KDELR1P24390 212 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CD1BP29016 333 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CRABP1P29762 137 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CMPK1P30085 196 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 FEN1P39748 380 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RPL35P42766 123 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CDKN2CP42773 168 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ALDH3B1P43353 468 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 KIR3DL2P43630 455 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 FHITP49789 147 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ATP4BP51164 291 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 GEMP55040 296 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PPIAP62937 165 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ERVK-8P63133 956 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PLGLB1Q02325 96 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 KRR1Q13601 381 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 SNTB1Q13884 538 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 GPR176Q14439 515 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PRPSAP1Q14558 356 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 SLC10A1Q14973 349 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNHIT3Q15649 155 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 NSDHLQ15738 373 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZNF829Q3KNS6 432 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CHRFAM7AQ494W8 412 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ETFRF1Q6IPR1 90 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZFP1Q6P2D0 407 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ZCCHC12Q6PEW1 402 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 METAP1DQ6UB28 335 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PET117Q6UWS5 81 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 LRRC74BQ6ZQY2 392 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PAGE2Q7Z2X7 111 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ANKRD37Q7Z713 158 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RPRMLQ8N4K4 120 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 C2orf73Q8N5S3 287 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CLDN19Q8N6F1 224 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CSNK1A1LQ8N752 337 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PQLC3Q8N755 202 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 LINC01555Q8NAE3 123 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 FNDC5Q8NAU1 212 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR2L5Q8NG80 312 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR5M9Q8NGP3 310 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR5H6Q8NGV6 325 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 OR51Q1Q8NH59 317 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 NANPQ8TBE9 248 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CD300LFQ8TDQ1 290 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 TCP10LQ8TDR4 215 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 TFB1MQ8WVM0 346 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 NSMAFQ92636 917 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 UFD1Q92890 307 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 MCUR1Q96AQ8 359 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 EXOSC8Q96B26 276 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CAPZA3Q96KX2 299 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RILPQ96NA2 401 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 FOPNLQ96NB1 174 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ERGIC2Q96RQ1 377 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 NPAS2Q99743 824 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 APOL2Q9BQE5 337 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 TCEAL7Q9BRU2 100 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 MFFQ9GZY8 342 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ATG10Q9H0Y0 220 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 METTL9Q9H1A3 318 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RMND5AQ9H871 391 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 PNPLA3Q9NST1 481 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 CCDC59Q9P031 241 aaKnown RBP3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ABCD2Q9UBJ2 740 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 BCAP29Q9UHQ4 241 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 GLS2Q9UI32 602 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 RPH3ALQ9UNE2 315 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ACOT9Q9Y305 439 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 EML6Q6ZMW3 1958 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 ANK2Q01484 3957 aa3.68□□□□□ -1.82
HMGB3P5-201ENST00000428894 FREM3P0C091 2139 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 A0A075B6Q4 140 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 A0A0A6YYC8 382 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 A0A0A6YYH2 397 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 TRBV5-4A0A0C4DH59 114 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 A0A1W2PRV1 198 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PQLC2LA1A4F0 135 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 A6NJ64 397 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 I3L1I5 382 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 SCAMP2O15127 329 aaKnown RBP3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 TCAPO15273 167 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 PSMD3O43242 534 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 HCN1O60741 890 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 AGTP01019 485 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 IGHG3P01860 377 aa3.67□□□□□ -1.82
HMGB3P5-201ENST00000428894 IFNA4P05014 189 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms