RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 GABRB3P28472 473 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 OR10A3P58181 314 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 LCN2P80188 198 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 B4GALNT1Q00973 533 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 ACKR1Q16570 336 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 IL34Q6ZMJ4 242 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SAMD12Q8N8I0 201 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 RBM14Q96PK6 669 aaKnown RBP8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 VKORC1Q9BQB6 163 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SCO1O75880 301 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 TNFSF8P32971 234 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 ZNF136P52737 540 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 HYAL4Q2M3T9 481 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CFAP77Q6ZQR2 320 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 FGGYQ96C11 551 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 RABL2BQ9UNT1 228 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 DNAJC15Q9Y5T4 150 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 MYH11P35749 1972 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 H3BSA7 217 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CYR61O00622 381 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 MSTNO14793 375 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 P2RX6O15547 441 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 NME2P1O60361 137 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 RPS17P08708 135 aaKnown RBP8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 OR10J4P0C629 311 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 NME2P22392 152 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 NPBWR1P48145 328 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SNRPGP62308 76 aaKnown RBP8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 OR2B11Q5JQS5 317 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CLVS2Q5SYC1 327 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CORO6Q6QEF8 472 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 EHFQ9NZC4 300 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 LPAR3Q9UBY5 353 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 HILPDAQ9Y5L2 63 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 GPR137BO60478 399 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CTSVO60911 334 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 CLDN1O95832 211 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 AMY2AP04746 511 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 OSMP13725 252 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 GUCA2AQ02747 115 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SYT9Q86SS6 491 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 Q8N402 240 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 BMPERQ8N8U9 685 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SYNPO2LQ9H987 977 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 PDFQ9HBH1 243 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SLC23A1Q9UHI7 598 aa8.24□□□□□ -1.09
LIMCH1-202ENST00000381753 SPAG17Q6Q759 2223 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 RPS10-NUDT3A0A1W2PQS6 291 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 GNG3P63215 75 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 S100A12P80511 92 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 AQP6Q13520 282 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 FAHD1Q6P587 224 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 Q8IYB0 196 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ACBD4Q8NC06 268 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 SEC14L4Q9UDX3 406 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 DVL1O14640 695 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 DAOP14920 347 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 SDHAP31040 664 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 DVL1P1P54792 670 aaPredicted RBP8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 SPATS1Q496A3 300 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 FAM209AQ5JX71 171 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ST6GALNAC3Q8NDV1 305 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 STON2Q8WXE9 905 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ATG101Q9BSB4 218 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 FBXO7Q9Y3I1 522 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 INSIG2Q9Y5U4 225 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 TMEM30CPA0ZSE6 113 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 LRP5LA4QPB2 252 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 GOSR2O14653 212 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 GPX3P22352 226 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ACTBP60709 375 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 KHDC1Q4VXA5 237 aaKnown RBP8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 KCTD20Q7Z5Y7 419 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ZFP41Q8N8Y5 198 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 OR52L2PQ8NGH6 319 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 OR10V1Q8NGI7 309 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 PSD2Q9BQI7 771 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 CXorf36Q9H7Y0 433 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 PARP11Q9NR21 331 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 PTTG2Q9NZH5 202 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 KIR2DS1A0A191URI9 304 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 CELA2AP08217 269 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 OR5G3P0C626 314 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 S100A4P26447 101 aaKnown RBP8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 CDAP32320 146 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 KIR2DS4P43632 304 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 TFPI2P48307 235 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 KIR2DS1Q14954 304 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 LPCAT3Q6P1A2 487 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 DTWD1Q8N5C7 304 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 C11orf44Q8N8P7 122 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 ABHD3Q8WU67 409 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 RAB2BQ8WUD1 216 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 Q96MF0 132 aa8.23□□□□□ -1.09
LIMCH1-202ENST00000381753 SDF2Q99470 211 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms