RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PARP8Q8N3A8 854 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 OR13G1Q8NGZ3 307 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 OR52J3Q8NH60 311 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 UPRTQ96BW1 309 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 GPX7Q96SL4 187 aaPredicted RBP9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 WACQ9BTA9 647 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 MRI1Q9BV20 369 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF696Q9H7X3 374 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 RPS6KA6Q9UK32 745 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 B9D1Q9UPM9 204 aa9.64□□□□□ -0.87
PRPF40B-212ENST00000551111 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 A0A1B0GWJ7 208 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 A0A1W2PRQ8 180 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 C22orf46C9J442 243 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 SURF4O15260 269 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 FCN3O75636 299 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 TXNDC12O95881 172 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 PSKH1P11801 424 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RPS2P15880 293 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 TUBG1P23258 451 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RPS27P42677 84 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 DGCR6Q14129 220 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 KRTAP27-1Q3LI81 207 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 PRAMEF6Q5VXH4 476 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 GPR139Q6DWJ6 353 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC27A4Q6P1M0 643 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF841Q6ZN19 808 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 COLCA1Q6ZS62 124 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RRM2BQ7LG56 351 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RNF148Q8N7C7 305 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RP9Q8TA86 221 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNRF4Q8WWF5 429 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 FAM162AQ96A26 154 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 APOBEC3DQ96AK3 386 aaPredicted RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF582Q96NG8 517 aaPredicted RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 NMNAT3Q96T66 252 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 TUBG2Q9NRH3 451 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 UFSP2Q9NUQ7 469 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF446Q9NWS9 450 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 OR5V1Q9UGF6 321 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 TMEM5Q9Y2B1 443 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 LRCH1Q9Y2L9 728 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 V9GYQ6 96 aa9.63□□□□□ -0.87
PRPF40B-212ENST00000551111 KIR2DS1A0A191URI9 304 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 UNC119BA6NIH7 251 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 F5H5K5 113 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 FAM20BO75063 409 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 ACSM4P0C7M7 580 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 HIST1H1CP16403 213 aaKnown RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 GNB2P62879 340 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 COX10Q12887 443 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 GK2Q14410 553 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 ZNF404Q494X3 552 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 RUSC1-AS1Q66K80 236 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC18B1Q6NT16 456 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 LYPD4Q6UWN0 246 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 DPY19L2P2Q6ZN68 376 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 MUC20Q8N307 709 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 FITM2Q8N6M3 262 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 GJC3Q8NFK1 279 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 OR10S1Q8NGN2 331 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 OR4K13Q8NH42 304 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 NEIL1Q96FI4 390 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 DHRS1Q96LJ7 313 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 COQ7Q99807 217 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 KCTD14Q9BQ13 255 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 NUDT16L1Q9BRJ7 211 aaKnown RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 RASSF4Q9H2L5 321 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 ANKRD19PQ9H560 264 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 MRPL22Q9NWU5 206 aaKnown RBP9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 TMCC3Q9ULS5 477 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 POLR1DQ9Y2S0 133 aa9.62□□□□□ -0.87
PRPF40B-212ENST00000551111 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 CLDN34H7C241 214 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SLC22A2O15244 555 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SFTPBP07988 381 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 RHCEP18577 417 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 FPR3P25089 353 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 GGT2P36268 569 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 MDH1P40925 334 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 PITPNBP48739 271 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 SRP9P49458 86 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 NUDT2P50583 147 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 PSME3P61289 254 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 FGF12P61328 243 aa9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 ELF3P78545 371 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-212ENST00000551111 RELBQ01201 579 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms