RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 LRP12Q9Y561 859 aa12.12□□□□□ -0.47
UBXN1-205ENST00000525004 CELSR2Q9HCU4 2923 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 METTL15A6NJ78 407 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 ACOD1A6NK06 481 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 PTGES3LE9PB15 166 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 F5H5K5 113 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 M0R135 149 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 MRPS14O60783 128 aaKnown RBP12.11□□□□□ -0.47
UBXN1-205ENST00000525004 CTAG2O75638 210 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 CD3EP07766 207 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 TUBG1P23258 451 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 COL8A1P27658 744 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 ETV1P50549 477 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 MMP16P51512 607 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 UCP2P55851 309 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 TPTEP56180 551 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 IRF3Q14653 427 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 KRT77Q7Z794 578 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 NAA40Q86UY6 237 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 ZNF786Q8N393 782 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-205ENST00000525004 SGCDQ92629 289 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 SPTSSAQ969W0 71 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 ZNF799Q96GE5 643 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
UBXN1-205ENST00000525004 RNF115Q9Y4L5 304 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
UBXN1-205ENST00000525004 DSCAMO60469 2012 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 A0A1W2PPR1 153 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 TMEM129A0AVI4 362 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 MAGEB4O15481 346 aaPredicted RBP12.1□□□□□ -0.47
UBXN1-205ENST00000525004 HTR1AP08908 422 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 GLRXP35754 106 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 RAD52P43351 418 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 RGS6P49758 472 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 RIDAP52758 137 aaKnown RBP12.1□□□□□ -0.47
UBXN1-205ENST00000525004 OR12D2P58182 307 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ACTA2P62736 377 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ACTG2P63267 376 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 GALK2Q01415 458 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 TAF13Q15543 124 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 LIPNQ5VXI9 398 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 FDX2Q6P4F2 183 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ARL9Q6T311 187 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 SPATC1Q76KD6 591 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 PRSS48Q7RTY5 328 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ZNF101Q8IZC7 436 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 SNX33Q8WV41 574 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 PIK3IP1Q96FE7 263 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 BCL2L14Q9BZR8 327 aa12.1□□□□□ -0.47
UBXN1-205ENST00000525004 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 PSMD9O00233 223 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 SMPD2O60906 423 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 PLAUP00749 431 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 NGFP01138 241 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 KRT8P05787 483 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 TACSTD2P09758 323 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 PRKXP51817 358 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
UBXN1-205ENST00000525004 UNQ6126/PRO20091Q6UXV3 157 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
UBXN1-205ENST00000525004 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 OR52N1Q8NH53 320 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 RORBQ92753 470 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 APOBEC3DQ96AK3 386 aaPredicted RBP12.09□□□□□ -0.47
UBXN1-205ENST00000525004 DOK1Q99704 481 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 KCNS3Q9BQ31 491 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 ZNF442Q9H7R0 627 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 FAM206AQ9NX38 181 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 ERVK-18Q9QC07 812 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 EIF3KQ9UBQ5 218 aaKnown RBP12.09□□□□□ -0.47
UBXN1-205ENST00000525004 CLEC2DQ9UHP7 191 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 IKZF2Q9UKS7 526 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
UBXN1-205ENST00000525004 CENPEQ02224 2701 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 LRBAP50851 2863 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 E7EQL1 145 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 RGS10O43665 173 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 PNPP00491 289 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 MYL12AP19105 171 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 CCNOP22674 350 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 ANOS1P23352 680 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 HSD11B1P28845 292 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 CX3CR1P49238 355 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
UBXN1-205ENST00000525004 TLE4Q04727 773 aa12.08□□□□□ -0.48
UBXN1-205ENST00000525004 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms