RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TMEM150AQ86TG1 271 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 CHST4Q8NCG5 386 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 STEAP2Q8NFT2 490 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 OR4M1Q8NGD0 313 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 OR1S2Q8NGQ3 325 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 OR1J4Q8NGS1 313 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 RAB3IL1Q8TBN0 382 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 GPR151Q8TDV0 419 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 LRRC29Q8WV35 223 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 N4BP2L2Q92802 583 aaPredicted RBP0.56□□□□□ -2.32
CCDC93-209ENST00000488908 TMEM230Q96A57 120 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 CWH43Q9H720 699 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 ASF1BQ9NVP2 202 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 PDP1Q9P0J1 537 aaPredicted RBP0.56□□□□□ -2.32
CCDC93-209ENST00000488908 NUP50Q9UKX7 468 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 RAB23Q9ULC3 237 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 AP1M2Q9Y6Q5 423 aa0.56□□□□□ -2.32
CCDC93-209ENST00000488908 DENND4AQ7Z401 1863 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 IGLV1-36A0A0B4J1U3 117 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 LYRM9A8MSI8 78 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 NDUFC2-KCTD14E9PQ53 114 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 GMFGO60234 142 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SCO1O75880 301 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CLPXO76031 633 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CLIC3O95833 236 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 IGKV1-16P04430 117 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SERPIND1P05546 499 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 UQCRFS1P1P0C7P4 283 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 MCF2P10911 925 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 ETS2P15036 469 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 ZNF250P15622 560 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 GGT1P19440 569 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 KITLGP21583 273 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CD86P42081 329 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CCNHP51946 323 aaPredicted RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 RND2P52198 227 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 ARFIP1P53367 373 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TGM3Q08188 693 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SIGLEC14Q08ET2 396 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 PNOCQ13519 176 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 RCAN2Q14206 197 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CCDC152Q4G0S7 254 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TMEM69Q5SWH9 247 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CPTPQ5TA50 214 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 AMMECR1LQ6DCA0 310 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 MORN3Q6PF18 240 aaPredicted RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TBPL2Q6SJ96 375 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 MS4A15Q8N5U1 240 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 LRRC75AQ8NAA5 344 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 LY6G5BQ8NDX9 201 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SLC26A10Q8NG04 563 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 OR2Z1Q8NG97 314 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 OR10AD1Q8NGE0 317 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 OR1L6Q8NGR2 347 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 PLPPR1Q8TBJ4 325 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SLC7A13Q8TCU3 470 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SYAP1Q96A49 352 aaPredicted RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 DUS3LQ96G46 650 aaKnown RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 SLC41A3Q96GZ6 507 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 C12orf42Q96LP6 360 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 GPR82Q96P67 336 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 OR5B12Q96R08 314 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 ABCG5Q9H222 651 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 DUSP21Q9H596 190 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TRIM45Q9H8W5 580 aaPredicted RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TMEM27Q9HBJ8 222 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 MED4Q9NPJ6 270 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 NLE1Q9NVX2 485 aaPredicted RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 HMGXB4Q9UGU5 601 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 CTNNA3Q9UI47 895 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 LSM7Q9UK45 103 aaKnown RBP0.55□□□□□ -2.32
CCDC93-209ENST00000488908 R4GN34 69 aa0.55□□□□□ -2.32
CCDC93-209ENST00000488908 TSPOAP1O95153 1857 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 COL22A1Q8NFW1 1626 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 IGHV1-69DA0A0B4J2H0 117 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 OR52A4PA6NMU1 304 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 PDZK1P1A8MUH7 402 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 CENPBD1B2RD01 187 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 TNFRSF11BO00300 401 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 OVOL1O14753 267 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 KLHL41O60662 606 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 RPN2P04844 631 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 EIF4EP06730 217 aaKnown RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 CRYGBP07316 175 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 MMP7P09237 267 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 HSPD1P10809 573 aaKnown RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 IFI30P13284 250 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 ATF6P18850 670 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 U2AF2P26368 475 aaKnown RBP eCLIP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 SEC61GP60059 68 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 LRRC23Q53EV4 343 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 GPR107Q5VW38 600 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 SLC25A24Q6NUK1 477 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 TMPPEQ6ZT21 453 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 EGFL6Q8IUX8 553 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 STK40Q8N2I9 435 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 NPWQ8N729 165 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 SPATA4Q8NEY3 305 aa0.54□□□□□ -2.32
CCDC93-209ENST00000488908 CPNE4Q96A23 557 aaPredicted RBP0.54□□□□□ -2.32
CCDC93-209ENST00000488908 CCDC126Q96EE4 140 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms