RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TPD52L3Q96J77 140 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 ATP6V1G3Q96LB4 118 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 COQ7Q99807 217 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 NDEL1Q9GZM8 345 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 SYT4Q9H2B2 425 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 VSX1Q9NZR4 365 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-209ENST00000463631 KIF17Q9P2E2 1029 aa14.37□□□□□ -0.11
HMGN1-209ENST00000463631 P2RY10O00398 339 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 FFAR1O14842 300 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 RER1O15258 196 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 KHDRBS3O75525 346 aaKnown RBP14.36□□□□□ -0.11
HMGN1-209ENST00000463631 IFNW1P05000 195 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 MMP9P14780 707 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 SELEP16581 610 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 CFHR2P36980 270 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 KRR1Q13601 381 aaKnown RBP14.36□□□□□ -0.11
HMGN1-209ENST00000463631 ZBED5Q49AG3 693 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 FAM201AQ5SY85 155 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 GPR139Q6DWJ6 353 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 ASPHD2Q6ICH7 369 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 LYPD2Q6UXB3 125 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 COLCA1Q6ZS62 124 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 MBOAT2Q6ZWT7 520 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 ADCK1Q86TW2 530 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 BHLHE23Q8NDY6 225 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 LZICQ8WZA0 190 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 GPX7Q96SL4 187 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-209ENST00000463631 PKP2Q99959 881 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 RBM4BQ9BQ04 359 aaKnown RBP14.36□□□□□ -0.11
HMGN1-209ENST00000463631 FNDC11Q9BVV2 318 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 NMNAT1Q9HAN9 279 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-209ENST00000463631 MRGBPQ9NV56 204 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 RHCGQ9UBD6 479 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 SNX13Q9Y5W8 968 aa14.36□□□□□ -0.11
HMGN1-209ENST00000463631 A0A087WUU8 490 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 BBIP1A8MTZ0 92 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 ZNF879B4DU55 563 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 SLC16A7O60669 478 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 CLPXO76031 633 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 LIPFP07098 398 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 SFTPBP07988 381 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 IRF2P14316 349 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 FPR3P25089 353 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 SDHAP31040 664 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 CD200P41217 278 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 GPR4P46093 362 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 RAD23AP54725 363 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 MAB21L1Q13394 359 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 CLEC12AQ5QGZ9 265 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 OTPQ5XKR4 325 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 CD276Q5ZPR3 534 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 RUSC1-AS1Q66K80 236 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 PGM2L1Q6PCE3 622 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 ZNF730Q6ZMV8 503 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 GJC3Q8NFK1 279 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 OR2T12Q8NG77 320 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 OR11L1Q8NGX0 322 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 TBX15Q96SF7 602 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 PCGF1Q9BSM1 259 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 NRIP3Q9NQ35 241 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 TNFRSF19Q9NS68 423 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 TMEM100Q9NV29 134 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 TMEM5Q9Y2B1 443 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 COA3Q9Y2R0 106 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-209ENST00000463631 RNF114Q9Y508 228 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
HMGN1-209ENST00000463631 IGHV3-64DA0A0J9YX35 117 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 CENPVL3A0A0U1RRI6 287 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 MRASO14807 208 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 COX10Q12887 443 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 KRTAP27-1Q3LI81 207 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 LINC01006Q8NI28 216 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 TBC1D15Q8TC07 691 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 GATAD2BQ8WXI9 593 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 UBE2FQ969M7 185 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 HCAR1Q9BXC0 346 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 ANKRD19PQ9H560 264 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 ACOXLQ9NUZ1 547 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 INTS9Q9NV88 658 aaKnown RBP14.34□□□□□ -0.11
HMGN1-209ENST00000463631 POLR1DQ9Y2S0 133 aa14.34□□□□□ -0.11
HMGN1-209ENST00000463631 A0A0G2JND7 137 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 SLC22A31A6NKX4 558 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 J3KTA2 159 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 GPR137BO60478 399 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 EDF1O60869 148 aaKnown RBP14.33□□□□□ -0.12
HMGN1-209ENST00000463631 FAM20BO75063 409 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 TOX4O94842 621 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 NDUFB2O95178 105 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 PTBP3O95758 552 aaKnown RBP14.33□□□□□ -0.12
HMGN1-209ENST00000463631 HLA-DPB1P04440 258 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 YAP1P46937 504 aaKnown RBP14.33□□□□□ -0.12
HMGN1-209ENST00000463631 PROK1P58294 105 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 GK2Q14410 553 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-209ENST00000463631 KCNJ8Q15842 424 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 TAF9Q16594 264 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 VTCN1Q7Z7D3 282 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 LDLRAD3Q86YD5 345 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 TRIM15Q9C019 465 aa14.33□□□□□ -0.12
HMGN1-209ENST00000463631 NUAK2Q9H093 628 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms