RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 NEIL2Q969S2 332 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 DTNBP1Q96EV8 351 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 RMND5BQ96G75 393 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 SH3GL1Q99961 368 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 C1orf50Q9BV19 199 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 SRXN1Q9BYN0 137 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TM6SF2Q9BZW4 377 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 PTGES2Q9H7Z7 377 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 RDH14Q9HBH5 336 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 HEBP1Q9NRV9 189 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 SLC35D1Q9NTN3 355 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 POLR3HQ9Y535 204 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TIMM22Q9Y584 194 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 TET1Q8NFU7 2136 aa3.08□□□□□ -1.92
HMGB3P6-201ENST00000444896 KIAA1671Q9BY89 1806 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF106Q9H2Y7 1883 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ANAPC1Q9H1A4 1944 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A087WXM4 84 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A1B0GWB2 263 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 K7N7A8 449 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 FXYD1O00168 92 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 LSM1O15116 133 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 TPST1O60507 370 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 NOL3O60936 208 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 STK16O75716 305 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SLC25A14O95258 325 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 H6PDO95479 791 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 GUCA1CO95843 209 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CD160O95971 181 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CA1P00915 261 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 IGHV3-48P01763 117 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 IL6P05231 212 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 C8GP07360 202 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CAPN1P07384 714 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 MPC1LP0DKB6 136 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PRPS2P11908 318 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 DRD5P21918 477 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 HTR1EP28566 365 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 AQP1P29972 269 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PRDX3P30048 256 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CD80P33681 288 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 HNMTP50135 292 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PLA2G16P53816 162 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ESRRGP62508 458 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SLC7A9P82251 487 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 LIPEQ05469 1076 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CHRNB3Q05901 458 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PJVKQ0ZLH3 352 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 APOFQ13790 326 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CAPRIN1Q14444 709 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 DMC1Q14565 340 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 GPNMBQ14956 572 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 HERPUD1Q15011 391 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ATP6AP1Q15904 470 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 GGTA1PQ4G0N0 100 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 NADK2Q4G0N4 442 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 KCTD21Q4G0X4 260 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 FBXO48Q5FWF7 155 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CDKL4Q5MAI5 379 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 C6orf52Q5T4I8 152 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 RIPPLY2Q5TAB7 128 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 AP1ARQ63HQ0 302 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 C22orf39Q6P5X5 142 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SBSNQ6UWP8 590 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 DNM1P46Q6ZS02 220 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 TMEM179BQ7Z7N9 219 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ERI1Q8IV48 349 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 TRIML2Q8N7C3 387 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR2L5Q8NG80 312 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR4F6Q8NGB9 312 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR2AP1Q8NGE2 309 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR8J3Q8NGG0 315 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ITFG1Q8TB96 612 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PAQR8Q8TEZ7 354 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SKA2Q8WVK7 121 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CANT1Q8WVQ1 401 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PIH1D2Q8WWB5 315 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 STARD8Q92502 1023 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 RPL3LQ92901 407 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ISG20Q96AZ6 181 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 DGCR14Q96DF8 476 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CENPNQ96H22 339 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF414Q96IQ9 312 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 C12orf66Q96MD2 445 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF641Q96N77 438 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 RDH12Q96NR8 316 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCDC115Q96NT0 180 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 LYSMD1Q96S90 227 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 COPS8Q99627 209 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CGREF1Q99674 301 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CIB1Q99828 191 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SLC39A3Q9BRY0 314 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 UGT2B28Q9BY64 529 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ANKRD60Q9BZ19 345 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 DPY30Q9C005 99 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ELOVL6Q9H5J4 265 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 RMND5AQ9H871 391 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 LRTM1Q9HBL6 345 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 AGPAT4Q9NRZ5 378 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 CMTM6Q9NX76 183 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms