RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 OIT3Q8WWZ8 545 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 SLC17A5Q9NRA2 495 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 TAAR2Q9P1P5 351 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 EXOGQ9Y2C4 368 aaKnown RBP9.4□□□□□ -0.91
LIN54-202ENST00000442461 YIPF1Q9Y548 306 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 NALCNQ8IZF0 1738 aa9.4□□□□□ -0.91
LIN54-202ENST00000442461 GNRH1P01148 92 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 SEMG1P04279 462 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 OR5AC1P0C628 307 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ANKRD34CP0C6C1 535 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 IRS1P35568 1242 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 P2RY4P51582 365 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 PAX5Q02548 391 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 BAXQ07812 192 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 PCK2Q16822 640 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 OR2T10Q8NGZ9 312 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 PFN4Q8NHR9 129 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 TAS2R4Q9NYW5 299 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 PTGESO14684 152 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ZNF207O43670 478 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 TMEM33P57088 247 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 DHODHQ02127 395 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ATP6V1FQ16864 119 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 FAHD2BQ6P2I3 314 aaPredicted RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 SLC39A11Q8N1S5 342 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 OR11G2Q8NGC1 345 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 SOCS4Q8WXH5 440 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ARSGQ96EG1 525 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 FAHD2AQ96GK7 314 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 SMDT1Q9H4I9 107 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 DHCR7Q9UBM7 475 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 TMEM184BQ9Y519 407 aaPredicted RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 GJE1A6NN92 205 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 HIST1H1BP16401 226 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 HOXD9P28356 352 aaPredicted RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 YBX1P67809 324 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 TMEM64Q6YI46 380 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 CYHR1Q6ZMK1 362 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 PELI1Q96FA3 418 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 OR10C1Q96KK4 312 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ZNF160Q9HCG1 818 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 MBD1Q9UIS9 605 aaPredicted RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 P2RY10O00398 339 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ADAP1O75689 374 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 CLDN1O95832 211 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 RAC2P15153 192 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 HIST1H1CP16403 213 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 WASP42768 502 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 AGFG1P52594 562 aaKnown RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 AGBL4Q5VU57 503 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 LAIR1Q6GTX8 287 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 MMP21Q8N119 569 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 RCBTB1Q8NDN9 531 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 C17orf47Q8NEP4 570 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ZNF2Q9BSG1 426 aaPredicted RBP9.39□□□□□ -0.91
LIN54-202ENST00000442461 HINT2Q9BX68 163 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ADGRL4Q9HBW9 690 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 NECAP2Q9NVZ3 263 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 ARFGEF2Q9Y6D5 1785 aa9.39□□□□□ -0.91
LIN54-202ENST00000442461 NSG1A0A0A6YYJ2 146 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 MAP1LC3B2A6NCE7 125 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 F6UZH7 168 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 WNT11O96014 354 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 AMTP48728 403 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 THBS3P49746 956 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 DAP3P51398 398 aaKnown RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 PDX1P52945 283 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 KIAA0040Q15053 153 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 CARD17Q5XLA6 110 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 TPGS2Q68CL5 300 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 WBP2NLQ6ICG8 309 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 MAP1LC3BQ9GZQ8 125 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 PCOLCE2Q9UKZ9 415 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 PIK3C2AO00443 1686 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 TRBV5-3A0A0A0MS03 114 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 CIDEAO60543 219 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 OR2J2O76002 312 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 DDAH2O95865 285 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 CD96P40200 585 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 SLC6A8P48029 635 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 SLC6A12P48065 614 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 DCAF12L2Q5VW00 463 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 DRAM2Q6UX65 266 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 NRSN1Q8IZ57 195 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 APCDD1Q8J025 514 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 NTNG2Q96CW9 530 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 DAZAP1Q96EP5 407 aaKnown RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 RTP3Q9BQQ7 232 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms