RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SLC35F2Q8IXU6 374 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 SYNPRQ8TBG9 265 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 SLC25A40Q8TBP6 338 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF799Q96GE5 643 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 COG8Q96MW5 612 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 KCNJ15Q99712 375 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 SYT3Q9BQG1 590 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 OR2J1Q9GZK6 312 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 DUSP13Q9UII6 198 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 STARD10Q9Y365 291 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 CSMD2Q7Z408 3487 aa16.5■□□□□ 0.23
HOXA9-202ENST00000396345 CSMD1Q96PZ7 3565 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 TMEM129A0AVI4 362 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 H0YJX3 145 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 J3QW42 95 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 H2BFMP0C1H6 154 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF250P15622 560 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 TUBG1P23258 451 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 HSD11B1P28845 292 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 GCH1P30793 250 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 OTX1P32242 354 aaPredicted RBP16.49■□□□□ 0.23
HOXA9-202ENST00000396345 ATP6V1E1P36543 226 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 CDKN1AP38936 164 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 OPRL1P41146 370 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 MTNR1AP48039 350 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 SLC6A9P48067 706 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 EVX1P49640 407 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 PRKXP51817 358 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 SELENOVP59797 346 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF718Q3SXZ3 478 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 NAA40Q86UY6 237 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 SETD9Q8NE22 299 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 OR5L1Q8NGL2 311 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 APOBEC3DQ96AK3 386 aaPredicted RBP16.49■□□□□ 0.23
HOXA9-202ENST00000396345 MARS2Q96GW9 593 aaKnown RBP16.49■□□□□ 0.23
HOXA9-202ENST00000396345 MNTQ99583 582 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 CACNG6Q9BXT2 260 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 TUBG2Q9NRH3 451 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 COPS3Q9UNS2 423 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 PMF1-BGLAPU3KQ54 211 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
HOXA9-202ENST00000396345 USF3Q68DE3 2245 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF670-ZNF695F2Z2N8 137 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 APOL3O95236 402 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 LCATP04180 440 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 AQP4P55087 323 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 KLF3P57682 345 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 IL18R1Q13478 541 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 MAD2L1BPQ15013 274 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 KCTD18Q6PI47 426 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 DRAM2Q6UX65 266 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 COLCA1Q6ZS62 124 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 KRT77Q7Z794 578 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF283Q8N7M2 679 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 KLF14Q8TD94 323 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 ASB17Q8WXJ9 295 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 RNFT2Q96EX2 444 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 DOK1Q99704 481 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 POFUT1Q9H488 388 aa16.48■□□□□ 0.23
HOXA9-202ENST00000396345 FBXO9Q9UK97 447 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-202ENST00000396345 H3BSA7 217 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 PHYHO14832 338 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 CLPTM1O96005 669 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 APOC1P02654 83 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 MPV17P39210 176 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 CX3CR1P49238 355 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 MBNL2Q5VZF2 373 aaKnown RBP16.47■□□□□ 0.23
HOXA9-202ENST00000396345 LRRN1Q6UXK5 716 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 APH1BQ8WW43 257 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 TFAP2CQ92754 450 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 TRMT61AQ96FX7 289 aaKnown RBP16.47■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF701Q9NV72 531 aaPredicted RBP16.47■□□□□ 0.23
HOXA9-202ENST00000396345 MYEF2Q9P2K5 600 aaKnown RBP16.47■□□□□ 0.23
HOXA9-202ENST00000396345 ITGB1BP2Q9UKP3 347 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 ARFGEF3Q5TH69 2177 aa16.47■□□□□ 0.23
HOXA9-202ENST00000396345 ARID1AO14497 2285 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 IGLV3-9A0A075B6K5 115 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 A0A1W2PPW3 197 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 GNAO1P09471 354 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 OR2T7P0C7T2 308 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 PAX1P15863 534 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 PTH2RP49190 550 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 CXCR4P61073 352 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 ISL1P61371 349 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF91Q05481 1191 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 ZNF322Q6U7Q0 402 aaPredicted RBP16.46■□□□□ 0.23
HOXA9-202ENST00000396345 C8orf59Q8N0T1 100 aaPredicted RBP16.46■□□□□ 0.23
HOXA9-202ENST00000396345 OR10H4Q8NGA5 316 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 OR2T27Q8NH04 317 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 PERPQ96FX8 193 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 TBX5Q99593 518 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 MROQ9BYG7 248 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 TTTY10Q9BZA0 68 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 GSX2Q9BZM3 304 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 DYNLRB1Q9NP97 96 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 SLCO1C1Q9NYB5 712 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 PTTG3PQ9NZH4 202 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms