RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FAM25AB3EWG3 89 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 FAM25CB3EWG5 89 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 FAM25GB3EWG6 89 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 QDPRP09417 244 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CALCBP10092 127 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ACHEP22303 614 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 PITPNBP48739 271 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CARD18P57730 90 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 LSM6P62312 80 aaKnown RBP13.31□□□□□ -0.28
SCAF11-204ENST00000395454 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ASPHD2Q6ICH7 369 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 PYHIN1Q6K0P9 492 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF585AQ6P3V2 769 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 NRARPQ7Z6K4 114 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 OR4M2Q8NGB6 313 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 OR2V1Q8NHB1 315 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 HTRA1Q92743 480 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 SLAMF6Q96DU3 332 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF845Q96IR2 970 aaPredicted RBP13.31□□□□□ -0.28
SCAF11-204ENST00000395454 PRDM14Q9GZV8 571 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 FAM206AQ9NX38 181 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 FBXL3Q9UKT7 428 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 SLC22A13Q9Y226 551 aa13.31□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF716A6NP11 495 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 PLA2G10O15496 165 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 CXCL13O43927 109 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 UBL3O95164 117 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 SNRPBP14678 240 aaKnown RBP13.3□□□□□ -0.28
SCAF11-204ENST00000395454 TLE1Q04724 770 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 RBPJQ06330 500 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 UBE2NLQ5JXB2 153 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 CD163Q86VB7 1156 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 RDH10Q8IZV5 341 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 ST6GALNAC3Q8NDV1 305 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 LGALS14Q8TCE9 139 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 ASB5Q8WWX0 329 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF385AQ96PM9 386 aaKnown RBP13.3□□□□□ -0.28
SCAF11-204ENST00000395454 WACQ9BTA9 647 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 NIPAL2Q9H841 368 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 MOB1AQ9H8S9 216 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 BRD7Q9NPI1 651 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 PNRC2Q9NPJ4 139 aaKnown RBP13.3□□□□□ -0.28
SCAF11-204ENST00000395454 GDF2Q9UK05 429 aaPredicted RBP13.3□□□□□ -0.28
SCAF11-204ENST00000395454 FOXJ3Q9UPW0 622 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 ETV7Q9Y603 341 aa13.3□□□□□ -0.28
SCAF11-204ENST00000395454 A0A1W2PPL8 197 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 B8ZZF3 427 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SSX4O60224 188 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 TPPPO94811 219 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 IGFBP3P17936 291 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 ENPP1P22413 925 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SOX2P48431 317 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CSNK1A1P48729 337 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 PLXDC2Q6UX71 529 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF704Q6ZNC4 412 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SLC22A4Q9H015 551 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 ABCG5Q9H222 651 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 MALT1Q9UDY8 824 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 OR52A1Q9UKL2 312 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 HHLA2Q9UM44 414 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 IGHV3-15A0A0B4J1V0 119 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 PRRG2O14669 202 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CTDSPLO15194 276 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 H2BFMP0C1H6 154 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CTSSP25774 331 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 PSMA6P60900 246 aaKnown RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SPATC1Q76KD6 591 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 C20orf196Q8IYI0 205 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 CPNE4Q96A23 557 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SLC25A38Q96DW6 304 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 C11orf54Q9H0W9 315 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 DDX28Q9NUL7 540 aaKnown RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 PAQR5Q9NXK6 330 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-204ENST00000395454 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 POLEQ07864 2286 aa13.29□□□□□ -0.28
SCAF11-204ENST00000395454 A0A0B4J203 849 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 TMEM269A0A1B0GVZ9 245 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 FIGNL2A6NMB9 653 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 C1QL1O75973 258 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 FAM157BP0CG42 384 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 MNDAP41218 407 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 HIST1H3AP68431 136 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 HIST2H3PS2Q5TEC6 136 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 TMEM244Q5VVB8 128 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 CARD17Q5XLA6 110 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 FAM166AQ6J272 317 aa13.28□□□□□ -0.28
SCAF11-204ENST00000395454 HIST2H3AQ71DI3 136 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms