RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 A0A1W2PNR3 127 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF98A6NK75 572 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 HMSDA8MTL9 139 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 RPS27AP62979 156 aaKnown RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 UBA52P62987 128 aaKnown RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 C1orf140Q5VVS0 124 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 C11orf87Q6NUJ2 197 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ATG4DQ86TL0 474 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 BIVMQ86UB2 503 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF595Q8IYB9 648 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CLEC1AQ8NC01 280 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 OR2AJ1Q8NGZ0 328 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 LILRB1Q8NHL6 650 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 LCORQ96JN0 433 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 WDR77Q9BQA1 342 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CRB3Q9BUF7 120 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 GAREM1Q9H706 876 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CNTD2Q9H8S5 307 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 KLK13Q9UKR3 277 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF254O75437 659 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 S100A9P06702 114 aaKnown RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 SERPINA2P20848 420 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 GPR3P46089 330 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CSNK2A1P68400 391 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 PLEKHN1Q494U1 663 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 SLC22A18ASQ8N1D0 253 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CSNK2A3Q8NEV1 391 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ASB5Q8WWX0 329 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 NUDT9Q9BW91 350 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 VSIG4Q9Y279 399 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 TPRP12270 2363 aaKnown RBP11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 FAM221AA4D161 298 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 RAB6AP20340 208 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ID4P47928 161 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 FAM76BQ5HYJ3 339 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CDCP2Q5VXM1 449 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 NAXDQ8IW45 347 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 OR4K17Q8NGC6 315 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CD300LFQ8TDQ1 290 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CTHRC1Q96CG8 243 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 SOX7Q9BT81 388 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 PLXNA2O75051 1894 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
TNFRSF21-201ENST00000296861 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 MED6O75586 246 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SPINK2P20155 84 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 GABRR1P24046 479 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 CD80P33681 288 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SLC36A1Q7Z2H8 476 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SUSD2Q9UGT4 822 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 A0A0D9SG52 128 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 FAM221BA6H8Z2 402 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 MGMTP16455 207 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 DHPSP49366 369 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 EEF1A1P5Q5VTE0 462 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 GLIPR1L1Q6UWM5 242 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 CUTCQ9NTM9 273 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 CD207Q9UJ71 328 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SNAPC5O75971 98 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 KCNJ3P48549 501 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 ASCL1P50553 236 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 PDCD1Q15116 288 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF141Q15928 474 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 PRAMEF20Q5VT98 475 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 FAM57BQ71RH2 274 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 RNF144BQ7Z419 303 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF440Q8IYI8 595 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SVBPQ8N300 66 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 LRRC18Q8N456 261 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 SLC26A10Q8NG04 563 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 FLVCR1-AS1Q8TAF5 88 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 UQCC2Q9BRT2 126 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 TMPRSS13Q9BYE2 586 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 RPS10P5Q9NQ39 176 aa11.93□□□□□ -0.5
TNFRSF21-201ENST00000296861 TRAV36DV7A0A075B6V5 113 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNHIT1O43257 154 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 HPP00738 406 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 DAOP14920 347 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 MST1P26927 711 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 ZNF93P35789 620 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 SRSF3P84103 164 aaKnown RBP11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 PDZK1IP1Q13113 114 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 CSRP2Q16527 193 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 CNTNAP3BQ96NU0 1288 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 PRRT1Q99946 306 aa11.92□□□□□ -0.5
TNFRSF21-201ENST00000296861 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms