RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CA7P43166 264 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 STARP49675 285 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 PER3P56645 1201 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 MXD1Q05195 221 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 WDR38Q5JTN6 314 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 BCL2L15Q5TBC7 163 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 OR7E24Q6IFN5 339 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 ELMOD2Q8IZ81 293 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 GDPD1Q8N9F7 314 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 IL17RDQ8NFM7 739 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 ITLN2Q8WWU7 325 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-201ENST00000238688 NABP1Q96AH0 204 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 C10orf35Q96D05 121 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 CCDC120Q96HB5 630 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 GPR137Q96N19 417 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 OR14A2Q96R54 314 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 DCLRE1CQ96SD1 692 aaKnown RBP11.61□□□□□ -0.55
SLIRP-201ENST00000238688 AMELYQ99218 206 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 EXO5Q9H790 373 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 TCF7L1Q9HCS4 588 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 OR52A1Q9UKL2 312 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
SLIRP-201ENST00000238688 LRBAP50851 2863 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TRGV8A0A0C4DH27 118 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 DHRS7CA6NNS2 312 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 AIPO00170 330 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
SLIRP-201ENST00000238688 OTX1P32242 354 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TNFSF8P32971 234 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 PTGER4P35408 488 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TALDO1P37837 337 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 KIR3DL2P43630 455 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 SELENOPP49908 381 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 RAB35Q15286 201 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TAF13Q15543 124 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 C3AR1Q16581 482 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 CARD17Q5XLA6 110 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 XKRXQ6PP77 449 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 FGD2Q7Z6J4 655 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ADGRE4PQ86SQ3 457 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 PRSS35Q8N3Z0 413 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 NKAIN3Q8N8D7 197 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 C15orf40Q8WUR7 153 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 SPTSSAQ969W0 71 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 KCNJ15Q99712 375 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ATF6BQ99941 703 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 SH3GL3Q99963 347 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 TTTY10Q9BZA0 68 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 NOX4Q9NPH5 578 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 G6PC2Q9NQR9 355 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ING1Q9UK53 422 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ETV7Q9Y603 341 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 APCP25054 2843 aa11.6□□□□□ -0.55
SLIRP-201ENST00000238688 ARHGAP21Q5T5U3 1957 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 IGHV3-15A0A0B4J1V0 119 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF587BE7ETH6 402 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CCL21O00585 134 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 UPK1BO75841 260 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 MPZL1O95297 269 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 GPANK1O95872 356 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 APOA1P02647 267 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CELA3AP09093 270 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CALCBP10092 127 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 EPXP11678 715 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 PSKH1P11801 424 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 NR4A2P43354 598 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 DEFA1P59665 94 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 DEFA3P59666 94 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CDSNQ15517 529 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 RGS21Q2M5E4 152 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 ELFN2Q5R3F8 820 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 OR2A2Q6IF42 318 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 WDFY1Q8IWB7 410 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CCDC36Q8IYA8 594 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 PARP16Q8N5Y8 322 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 OR52H1Q8NGJ2 320 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 SETD6Q8TBK2 473 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 ROBO4Q8WZ75 1007 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 HSD17B8Q92506 261 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 RGP1Q92546 391 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-201ENST00000238688 APH1AQ96BI3 265 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-201ENST00000238688 GMPPAQ96IJ6 420 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-201ENST00000238688 FOXB1Q99853 325 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 KCNS3Q9BQ31 491 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 ZNF416Q9BWM5 594 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 RBM24Q9BX46 236 aaKnown RBP11.59□□□□□ -0.55
SLIRP-201ENST00000238688 GPR35Q9HC97 309 aa11.59□□□□□ -0.55
SLIRP-201ENST00000238688 CENPMQ9NSP4 180 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms