RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 COX4I2Q96KJ9 171 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 DCLRE1CQ96SD1 692 aaKnown RBP8.55□□□□□ -1.04
GGA3-209ENST00000580646 MBOAT4Q96T53 435 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 COQ7Q99807 217 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 HCAR1Q9BXC0 346 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 C1QTNF6Q9BXI9 259 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 HDHD2Q9H0R4 259 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 WNT5BQ9H1J7 359 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 FAM118AQ9NWS6 357 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 HAO2Q9NYQ3 351 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 ASH2LQ9UBL3 628 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 NKX1-2Q9UD57 310 aaPredicted RBP8.55□□□□□ -1.04
GGA3-209ENST00000580646 PRELID1Q9Y255 219 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 SPEF1Q9Y4P9 236 aa8.55□□□□□ -1.04
GGA3-209ENST00000580646 NIPBLQ6KC79 2804 aaeCLIP8.54□□□□□ -1.04
GGA3-209ENST00000580646 ARFGEF3Q5TH69 2177 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 IGHV2OR16-5A0A0B4J2B6 119 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 OR6C6A6NF89 314 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 FAM171A2A8MVW0 826 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 E7EQL1 145 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 J3QW42 95 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 SGCEO43556 437 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 SYNGR3O43761 229 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 DOK2O60496 412 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 GPANK1O95872 356 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CD8AP01732 235 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 GYPBP06028 91 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CELA3BP08861 270 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 PATE4P0C8F1 98 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 STOMP27105 288 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CALCRP30988 508 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 APLNRP35414 380 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CDKN1AP38936 164 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 ECH1Q13011 328 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 IL18R1Q13478 541 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 OCLNQ16625 522 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 ZIK1Q3SY52 487 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 TTC23Q5W5X9 447 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 ZNF544Q6NX49 715 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 SLC22A25Q6T423 547 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CLEC9AQ6UXN8 241 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 UNQ6126/PRO20091Q6UXV3 157 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 Q71RC1 249 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 MEPCEQ7L2J0 689 aaKnown RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 VASH1Q7L8A9 365 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 SHFQ7M4L6 423 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 DTX2Q86UW9 622 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 TIGD4Q8IY51 512 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CPEB3Q8NE35 698 aaKnown RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 ZNF555Q8NEP9 628 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 OR51L1Q8NGJ5 315 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 OR2AJ1Q8NGZ0 328 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 RFKQ969G6 155 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 POM121L2Q96KW2 1035 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 FOXN4Q96NZ1 517 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 INTS14Q96SY0 518 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 TEAD3Q99594 435 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 DHRS9Q9BPW9 319 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 CDADC1Q9BWV3 514 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 OR51V1Q9H2C8 321 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 ZNF442Q9H7R0 627 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 MED20Q9H944 212 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 IMPAD1Q9NX62 359 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 H2AFY2Q9P0M6 372 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 RABL2AQ9UBK7 228 aaPredicted RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 WARS2Q9UGM6 360 aaKnown RBP8.54□□□□□ -1.04
GGA3-209ENST00000580646 POU2F3Q9UKI9 436 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 POLR1DQ9Y2S0 133 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 N6AMT1Q9Y5N5 214 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 GMPPBQ9Y5P6 360 aa8.54□□□□□ -1.04
GGA3-209ENST00000580646 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 CCDC182A6NF36 153 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 SNTNA6NMZ2 147 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ATP6V1G2-DDX39BF2Z307 99 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 H0YAE9 185 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 SMAD7O15105 426 aaKnown RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 LY6G6DO95868 133 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 GABRB1P18505 474 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 NR4A1P22736 598 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 TUBG1P23258 451 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 HTR1FP30939 366 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 GLRXP35754 106 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 RPS23P62266 143 aaKnown RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 GALK2Q01415 458 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 SPOCK1Q08629 439 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 POU4F2Q12837 409 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 APOFQ13790 326 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 MEP1BQ16820 701 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 LRRC36Q1X8D7 754 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 KRTAP27-1Q3LI81 207 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 KLHL12Q53G59 568 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ELFN2Q5R3F8 820 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 AGAP6Q5VW22 663 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ARL9Q6T311 187 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 GALNT4Q8N4A0 578 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 DHRSXQ8N5I4 330 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms