RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 HIST2H3PS2Q5TEC6 136 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 HIST2H3AQ71DI3 136 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.42□□□□□ -0.26
CRLF3-203ENST00000578692 JAZF1Q86VZ6 243 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 OR6V1Q8N148 313 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 OR4K13Q8NH42 304 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 ST7LQ8TDW4 575 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 IFT27Q9BW83 186 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 IL1RAPQ9NPH3 570 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 ARL8BQ9NVJ2 186 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 TMCC3Q9ULS5 477 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
CRLF3-203ENST00000578692 IGLV1-36A0A0B4J1U3 117 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ARPC2O15144 300 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 SURF4O15260 269 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 IGHV2-70P01814 119 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 HIST1H1CP16403 213 aaKnown RBP13.41□□□□□ -0.26
CRLF3-203ENST00000578692 GATA3P23771 443 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 FPR3P25089 353 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 NOS3P29474 1203 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ERFP50548 548 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 HNRNPA0Q13151 305 aaKnown RBP13.41□□□□□ -0.26
CRLF3-203ENST00000578692 HLXQ14774 488 aaPredicted RBP13.41□□□□□ -0.26
CRLF3-203ENST00000578692 CORO6Q6QEF8 472 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 PIGWQ7Z7B1 504 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ZNF283Q8N7M2 679 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 GNPDA2Q8TDQ7 276 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ITLN1Q8WWA0 313 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 APOBEC3DQ96AK3 386 aaPredicted RBP13.41□□□□□ -0.26
CRLF3-203ENST00000578692 COQ7Q99807 217 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 HDHD2Q9H0R4 259 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 PTTG3PQ9NZH4 202 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 ARL2BPQ9Y2Y0 163 aa13.41□□□□□ -0.26
CRLF3-203ENST00000578692 FBN3Q75N90 2809 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 IDH3BO43837 385 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 EPHA1P21709 976 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 RBMXP38159 391 aaKnown RBP13.4□□□□□ -0.26
CRLF3-203ENST00000578692 GSSP48637 474 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 GYS2P54840 703 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 GNGT1P63211 74 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 LCN2P80188 198 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 COX10Q12887 443 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 TSPAN31Q12999 210 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 RSPO1Q2MKA7 263 aaPredicted RBP13.4□□□□□ -0.26
CRLF3-203ENST00000578692 SLC36A3Q495N2 470 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 OR2T2Q6IF00 324 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 C16orf89Q6UX73 402 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 FBXW12Q6X9E4 464 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 ZDHHC21Q8IVQ6 265 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 DEFB107AQ8IZN7 70 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 OR5AS1Q8N127 324 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 ATG16L2Q8NAA4 619 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 CDADC1Q9BWV3 514 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 C7orf69Q9H7B7 122 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 RPRD1BQ9NQG5 326 aaKnown RBP13.4□□□□□ -0.26
CRLF3-203ENST00000578692 NDE1Q9NXR1 346 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 STAB1Q9NY15 2570 aa13.4□□□□□ -0.26
CRLF3-203ENST00000578692 FOXH1O75593 365 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 DCTN3O75935 186 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 MXRA7P84157 204 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 DBPQ10586 325 aaPredicted RBP13.39□□□□□ -0.27
CRLF3-203ENST00000578692 SPATS1Q496A3 300 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 TMEM155Q4W5P6 130 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 SLC27A4Q6P1M0 643 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 C1QL2Q7Z5L3 287 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 ZBTB46Q86UZ6 589 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 LRRC28Q86X40 367 aaPredicted RBP13.39□□□□□ -0.27
CRLF3-203ENST00000578692 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 SPICQ8N5J4 248 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
CRLF3-203ENST00000578692 SEMA6DQ8NFY4 1073 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 OR8G5Q8NG78 346 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 OR13G1Q8NGZ3 307 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 ZFAND2BQ8WV99 257 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 ZNF582Q96NG8 517 aaPredicted RBP13.39□□□□□ -0.27
CRLF3-203ENST00000578692 OR2V2Q96R30 315 aa13.39□□□□□ -0.27
CRLF3-203ENST00000578692 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
CRLF3-203ENST00000578692 ARHGAP32A7KAX9 2087 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 OR6C68A6NDL8 312 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 RGS9O75916 674 aaPredicted RBP13.38□□□□□ -0.27
CRLF3-203ENST00000578692 KRT36O76013 467 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 HLA-DQA2P01906 255 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 ADRA2CP18825 462 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
CRLF3-203ENST00000578692 HMGA2P52926 109 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 SLC35F1Q5T1Q4 408 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 USP43Q70EL4 1123 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 LINC00346Q8IVM7 164 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 SDR9C7Q8NEX9 313 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 OR52E2Q8NGJ4 325 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 OR2AJ1Q8NGZ0 328 aa13.38□□□□□ -0.27
CRLF3-203ENST00000578692 SIGLEC11Q96RL6 698 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms