RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 CLCF1Q9UBD9 225 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 ARHGAP23Q9P227 1491 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 ZCWPW2A0A1B0GU75 182 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 C7orf66A4D0T2 115 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 CCL25O15444 150 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 SLCO2B1O94956 709 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 PSMB6P28072 239 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 DUSP1P28562 367 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 PMELP40967 661 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 GALR1P47211 349 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 PPOXP50336 477 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 SNU13P55769 128 aaKnown RBP8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 ZNF385BQ569K4 471 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 ZNF626Q68DY1 528 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 ARSGQ96EG1 525 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 MS4A4AQ96JQ5 239 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 MRGPRX1Q96LB2 322 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 HARBI1Q96MB7 349 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 CITED2Q99967 270 aaPredicted RBP8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 B3GAT1Q9P2W7 334 aa8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
GTF2A1-203ENST00000553612 SNRPGP15A8MWD9 76 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 GZMHP20718 246 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 BRS3P32247 399 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 MRPS11P82912 194 aaKnown RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PIP5KL1Q5T9C9 394 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 FBXO16Q8IX29 292 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 ZSCAN4Q8NAM6 433 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 KCNE4Q8WWG9 221 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 MRIQ9BWK5 157 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SEMA6CQ9H3T2 930 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 TUBA4BQ9H853 241 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PLSCR4Q9NRQ2 329 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 NEU3Q9UQ49 428 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 GAPDHSO14556 408 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 WNT9AO14904 365 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PMS2P2O95744 297 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CPEP16870 476 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 BPIP17213 487 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PI3P19957 117 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 GABRR1P24046 479 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 ACBD7Q8N6N7 88 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PPT2Q9UMR5 302 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 ADAMTS5Q9UNA0 930 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 TRDV1A0A1B0GX56 115 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CLDN34H7C241 214 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 IFNA5P01569 189 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 AOAHP28039 575 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 HOXA6P31267 233 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 NCBP2P52298 156 aaKnown RBP eCLIP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 PDX1P52945 283 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SELENOTP62341 195 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 LCN6P62502 163 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 RPL7L1Q6DKI1 246 aaKnown RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 LAIR1Q6GTX8 287 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 DRAM2Q6UX65 266 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SAT2Q96F10 170 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SLC46A1Q96NT5 459 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 COLEC11Q9BWP8 271 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 FZD8Q9H461 694 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SLC2A4RGQ9NR83 387 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CD163L1Q9NR16 1453 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SLC22A20A6NK97 555 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SHC2P98077 582 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 VITQ6UXI7 678 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 RERGQ96A58 199 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 ISG20L2Q9H9L3 353 aaKnown RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 LPAR3Q9UBY5 353 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CCL15-CCL14A0A0B4J2E2 113 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 A8MVM7 634 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 SEMG1P04279 462 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 AGAP20933 346 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 RBX1P62877 108 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 JOSD1Q15040 202 aaPredicted RBP8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CMTM4Q8IZR5 234 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 GATSQ8NAP1 163 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 AGBL5Q8NDL9 886 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 OR2G3Q8NGZ4 309 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 OR4K13Q8NH42 304 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 ST6GALNAC6Q969X2 333 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
GTF2A1-203ENST00000553612 CDCA4Q9BXL8 241 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms