RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SIGLEC11Q96RL6 698 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 B4GALT7Q9UBV7 327 aa17.6■□□□□ 0.41
SUDS3-204ENST00000543473 A0A0A6YYD5 115 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 NQO2P16083 231 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TBPP20226 339 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 RAB13P51153 203 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 EEF1A1P68104 462 aaKnown RBP17.59■□□□□ 0.41
SUDS3-204ENST00000543473 HNF4GQ14541 408 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TMEM229BQ8NBD8 167 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 ZG16BQ96DA0 208 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 NECAP2Q9NVZ3 263 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TCRBV16S1A1N1A0A5B0 115 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 HMSDA8MTL9 139 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 SLC17A1Q14916 467 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 RPUSD3Q6P087 351 aaKnown RBP17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TMPRSS11FQ6ZWK6 438 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 C1QTNF6Q9BXI9 259 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 NRSN2Q9GZP1 204 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 SERTAD4Q9NUC0 356 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 RP1L1Q8IWN7 2480 aaPredicted RBP17.59■□□□□ 0.41
SUDS3-204ENST00000543473 HSPB2A8KAH6 182 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 SULT1A3P0DMM9 295 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 SULT1A4P0DMN0 295 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 GZMMP51124 257 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TESK1Q15569 626 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 HSPB2Q16082 182 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 ATPAF1Q5TC12 328 aaPredicted RBP17.59■□□□□ 0.41
SUDS3-204ENST00000543473 RSC1A1Q92681 617 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 C2orf50Q96LR7 162 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 KCND3Q9UK17 655 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 FFAR1O14842 300 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 FOSL1P15407 271 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 C21orf58P58505 322 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 ZNF362Q5T0B9 420 aaPredicted RBP17.59■□□□□ 0.41
SUDS3-204ENST00000543473 OTPQ5XKR4 325 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 HPSE2Q8WWQ2 592 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 SPACA5Q96QH8 159 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 ABHD6Q9BV23 337 aa17.59■□□□□ 0.41
SUDS3-204ENST00000543473 TRAPPC2LH3BP13 241 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 BCAT2O15382 392 aaPredicted RBP17.58■□□□□ 0.41
SUDS3-204ENST00000543473 GNB3P16520 340 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 CLDN17P56750 224 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 SNRPEP62304 92 aaKnown RBP17.58■□□□□ 0.41
SUDS3-204ENST00000543473 CDKN3Q16667 212 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 KIRREL2Q6UWL6 708 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 EXD3Q8N9H8 876 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 OR5L1Q8NGL2 311 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 PSMF1Q92530 271 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 PCDHGA5Q9Y5G8 931 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 TRIP11Q15643 1979 aa17.58■□□□□ 0.41
SUDS3-204ENST00000543473 RNASEK-C17orf49H0YIS7 233 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 TBX19O60806 448 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 ZFPL1O95159 310 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 MSMO1Q15800 293 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 HAGHQ16775 308 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 IL34Q6ZMJ4 242 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 MISPQ8IVT2 679 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 LINC00615Q96LM1 132 aaPredicted RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 C20orf141Q9NUB4 165 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 PADI1Q9ULC6 663 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 SIT1Q9Y3P8 196 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 A0A087WV62 115 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 CEBPZOSA8MTT3 80 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 BHLHE40O14503 412 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 WISP3O95389 354 aaPredicted RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 C17orf67Q0P5P2 114 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 AADACL3Q5VUY0 350 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 OR5M8Q8NGP6 311 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 CHAC2Q8WUX2 184 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 EMG1Q92979 244 aaKnown RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 AKR1E2Q96JD6 320 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 SLCO1C1Q9NYB5 712 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 TBC1D29Q9UFV1 150 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 SRPK3Q9UPE1 567 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 ERVH48-1M5A8F1 160 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 SIGLEC6O43699 453 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 NKX2-1P43699 371 aaPredicted RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 ZNF133P52736 654 aaPredicted RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 BVESQ8NE79 360 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 PLEKHA2Q9HB19 425 aa17.58■□□□□ 0.4
SUDS3-204ENST00000543473 STRAPQ9Y3F4 350 aaKnown RBP17.58■□□□□ 0.4
SUDS3-204ENST00000543473 TRBV11-1A0A0K0K1C0 115 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 LINC01565O15544 149 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 CYTIPO60759 359 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 HPXP02790 462 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 H1FNTQ75WM6 255 aaPredicted RBP17.57■□□□□ 0.4
SUDS3-204ENST00000543473 OR4S1Q8NGB4 309 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 OR1J1Q8NGS3 322 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 ZNF2Q9BSG1 426 aaPredicted RBP17.57■□□□□ 0.4
SUDS3-204ENST00000543473 OR5V1Q9UGF6 321 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 AK3Q9UIJ7 227 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 DFFBO76075 338 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 FABP1P07148 127 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 SRYQ05066 204 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 GRINAQ7Z429 371 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 FBXL6Q8N531 539 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 BTF3L4Q96K17 158 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 WWTR1Q9GZV5 400 aa17.57■□□□□ 0.4
SUDS3-204ENST00000543473 CD79AP11912 226 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms