RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PRAMEF5Q5TYX0 476 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 PRAMEF6Q5VXH4 476 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 FBXO46Q6PJ61 603 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 DHRS11Q6UWP2 260 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 C17orf99Q6UX52 265 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 PHOSPHO2Q8TCD6 241 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ZIC5Q96T25 663 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 SOX7Q9BT81 388 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 NAV1Q8NEY1 1877 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 H7BYZ3 331 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 JTBO76095 146 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 MMP7P09237 267 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF85Q03923 595 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ETFDHQ16134 617 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TFAP2EQ6VUC0 442 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 PELI3Q8N2H9 469 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR51H1Q8NH63 302 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 PADI1Q9ULC6 663 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ACAA1P09110 424 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 PIPP12273 146 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 SPNP16150 400 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 MMP11P24347 488 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 KIR2DL3P43628 341 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OR5I1Q13606 314 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF750Q32MQ0 723 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 NKAIN2Q5VXU1 208 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 VRK3Q8IV63 474 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ZNRF4Q8WWF5 429 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 EPHX3Q9H6B9 360 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 RNF167Q9H6Y7 350 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 OBP2AQ9NY56 170 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TAS2R4Q9NYW5 299 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM129A0AVI4 362 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 KLRC4-KLRK1H3BQV0 150 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ADAM11O75078 769 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 BCL6P41182 706 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 GP2P55259 537 aaKnown RBP9.1□□□□□ -0.95
COL4A6-208ENST00000538570 FAM78AQ5JUQ0 283 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 FAM71E1Q6IPT2 247 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 FAM26EQ8N5C1 309 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM104Q8NE00 496 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF385DQ9H6B1 395 aa9.1□□□□□ -0.95
COL4A6-208ENST00000538570 ACSM4P0C7M7 580 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF90Q03938 601 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF468Q5VIY5 522 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 LINC00696Q6ZRV3 163 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 GRINAQ7Z429 371 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 MAVSQ7Z434 540 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 TMED6Q8WW62 240 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 C12orf49Q9H741 205 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 DHCR7Q9UBM7 475 aaKnown RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 A0A1B0GV90 55 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF17P17021 662 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 EIF4E2O60573 245 aaKnown RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 PDGFBP01127 241 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 GPX2P18283 190 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 POU3F3P20264 500 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 IRS1P35568 1242 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CLDN20P56880 219 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 PFN3P60673 137 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ABHD17CQ6PCB6 329 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CITED1Q99966 193 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM43Q9BTV4 400 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 RSRP1Q9BUV0 290 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 PARD6GQ9BYG4 376 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 GPR173Q9NS66 373 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ASIC5Q9NY37 505 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 PCDHGA9Q9Y5G4 932 aaKnown RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 TLCD2A6NGC4 264 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SLCO2B1O94956 709 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CPEP16870 476 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 GABRB1P18505 474 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CSF2RBP32927 897 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CSNK1G2P78368 415 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 EXT1Q16394 746 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ADGRG7Q96K78 797 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 Q96M85 177 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 CSF3RQ99062 836 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SLC23A1Q9UHI7 598 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 FITM1A5D6W6 292 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 HEXAP06865 529 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 APOBEC1P41238 236 aaKnown RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 TAS2R45P59539 299 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 OR8G1Q15617 311 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SAXO2Q658L1 398 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 RFLNAQ6ZTI6 216 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 ACOT7LQ6ZUV0 252 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-208ENST00000538570 TVP23CQ96ET8 276 aa9.09□□□□□ -0.95
COL4A6-208ENST00000538570 LYSMD1Q96S90 227 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms