RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ATP6V1G2-DDX39BF2Z307 99 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 F5H5K5 113 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 J3QRE1 110 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 FADS2O95864 444 aaKnown RBP11.88□□□□□ -0.51
CD44-224ENST00000526669 PTHP01270 115 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 OR2T7P0C7T2 308 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 LOXP28300 417 aaPredicted RBP11.88□□□□□ -0.51
CD44-224ENST00000526669 HSD11B1P28845 292 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 HGFACQ04756 655 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 TP53I3Q53FA7 332 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 TMEM108Q6UXF1 575 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 STX19Q8N4C7 294 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 ACBD7Q8N6N7 88 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 ZNF283Q8N7M2 679 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 FAM169BQ8N8A8 192 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 KBTBD8Q8NFY9 601 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 OR2T27Q8NH04 317 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 RNF133Q8WVZ7 376 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 POM121L2Q96KW2 1035 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 ESRP2Q9H6T0 727 aaKnown RBP11.88□□□□□ -0.51
CD44-224ENST00000526669 ELOVL3Q9HB03 270 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 FGF20Q9NP95 211 aaPredicted RBP11.88□□□□□ -0.51
CD44-224ENST00000526669 BRD7Q9NPI1 651 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 GRIP1Q9Y3R0 1128 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 LRRC42Q9Y546 428 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 LRP12Q9Y561 859 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 N6AMT1Q9Y5N5 214 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 TMEM14AQ9Y6G1 99 aa11.88□□□□□ -0.51
CD44-224ENST00000526669 LRBAP50851 2863 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 BAHCC1Q9P281 2608 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 PHYHO14832 338 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 IGHA1P01876 353 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 CD3EP07766 207 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 FAM157BP0CG42 384 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 COX5BP10606 129 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 SLC2A1P11166 492 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 PIPP12273 146 aaPredicted RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 ANOS1P23352 680 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 PTAFRP25105 342 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 OPRL1P41146 370 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 WNT5AP41221 380 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 ETV1P50549 477 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 ACTC1P68032 377 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 ACTA1P68133 377 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 RSPO1Q2MKA7 263 aaPredicted RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 RBM48Q5RL73 367 aaKnown RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 KCTD18Q6PI47 426 aaPredicted RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 SLC22A25Q6T423 547 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 SSX8Q7RTT4 187 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 NAA40Q86UY6 237 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 YIPF7Q8N8F6 280 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 OR1J2Q8NGS2 313 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 TMEM80Q96HE8 168 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 OR8B4Q96RC9 309 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 MNTQ99583 582 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 ALG8Q9BVK2 526 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 MOV10Q9HCE1 1003 aaKnown RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 DDX28Q9NUL7 540 aaKnown RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 FKBP14Q9NWM8 211 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 CNOT2Q9NZN8 540 aaKnown RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 ERVK-18Q9QC07 812 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 KCNN3Q9UGI6 736 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 MRM2Q9UI43 246 aaKnown RBP11.87□□□□□ -0.51
CD44-224ENST00000526669 TPRKBQ9Y3C4 175 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 PCDHGB1Q9Y5G3 927 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
CD44-224ENST00000526669 IRGMA1A4Y4 181 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 A6NNC1 897 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 M0R135 149 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 RPP14O95059 124 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 ABHD16AO95870 558 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CRYAAP02489 173 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 MT-ND2P03891 347 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CDK1P06493 297 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CCDC159P0C7I6 412 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 ACSM4P0C7M7 580 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 PAX7P23759 505 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CRHBPP24387 322 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 EEF1B2P24534 225 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 C21orf33P30042 268 aaPredicted RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 SLC6A9P48067 706 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CX3CR1P49238 355 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 RIDAP52758 137 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
CD44-224ENST00000526669 C1QTNF12Q5T7M4 302 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 VHLLQ6RSH7 139 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 SNX33Q8WV41 574 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 ASB17Q8WXJ9 295 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 ZNF799Q96GE5 643 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 KCNJ15Q99712 375 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 ERVK13-1Q9NX77 482 aa11.86□□□□□ -0.51
CD44-224ENST00000526669 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms