RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 FCGR2AP12318 317 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF708P17019 499 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ACHEP22303 614 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 STARP49675 285 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 LHX2P50458 406 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 NANOS3P60323 173 aaKnown RBP9.07□□□□□ -0.96
HDAC3-214ENST00000495485 PITPNAQ00169 270 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ECH1Q13011 328 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 WDR38Q5JTN6 314 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 FOXL2NBQ6ZUU3 175 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 TMEM123Q8N131 208 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ST6GALNAC3Q8NDV1 305 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 SETD6Q8TBK2 473 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ST7LQ8TDW4 575 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 SNRNP40Q96DI7 357 aaKnown RBP9.07□□□□□ -0.96
HDAC3-214ENST00000495485 MAP6Q96JE9 813 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 FOXN4Q96NZ1 517 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 SLX1AQ9BQ83 275 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 SRXN1Q9BYN0 137 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 LINC00470Q9BZP3 86 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 ZCCHC4Q9H5U6 513 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 GP6Q9HCN6 339 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-214ENST00000495485 OR52A1Q9UKL2 312 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 FOXJ3Q9UPW0 622 aa9.07□□□□□ -0.96
HDAC3-214ENST00000495485 NOSIPQ9Y314 301 aaKnown RBP9.07□□□□□ -0.96
HDAC3-214ENST00000495485 NCKAP5O14513 1909 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 IGKV3D-15A0A087WSY6 115 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF716A6NP11 495 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF724A8MTY0 619 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 TFECO14948 347 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 RAMP1O60894 148 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 CALCBP10092 127 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 CPN1P15169 458 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 RPS27P42677 84 aaKnown RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 INPP1P49441 399 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 EVX1P49640 407 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 SRYQ05066 204 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 SCN1BQ07699 218 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 DBPQ10586 325 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 NRN1LQ496H8 165 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 PYDC2Q56P42 97 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 FAM27BQ5VT28 67 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 GLT8D1Q68CQ7 371 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF324BQ6AW86 544 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 SYT9Q86SS6 491 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 LSRQ86X29 649 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 LINC00346Q8IVM7 164 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 OR8H2Q8N162 312 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF671Q8TAW3 534 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ROBO4Q8WZ75 1007 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 SPTSSAQ969W0 71 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 TMEM106AQ96A25 262 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 FOXRED1Q96CU9 486 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF385AQ96PM9 386 aaKnown RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 DCLRE1CQ96SD1 692 aaKnown RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ZDHHC11Q9H8X9 412 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 ABCB10Q9NRK6 738 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 GLRX2Q9NS18 164 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-214ENST00000495485 SPATA2Q9UM82 520 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 CSAG2Q9Y5P2 127 aa9.06□□□□□ -0.96
HDAC3-214ENST00000495485 IGKV1D-43A0A0B4J1Z2 117 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 A0A1B0GVI7 797 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 OR14I1A6ND48 311 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 AIPO00170 330 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 TBX1O43435 398 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 TPPPO94811 219 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ERCC1P07992 297 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-214ENST00000495485 CST2P09228 141 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 OCMP0CE72 109 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-214ENST00000495485 EPXP11678 715 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 NR4A2P43354 598 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 CLDN18P56856 261 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 TLE1Q04724 770 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 SCRN3Q0VDG4 424 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 IL18Q14116 193 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 INSL4Q14641 139 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 HACD4Q5VWC8 232 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 STAC2Q6ZMT1 411 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 SPATC1Q76KD6 591 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 LAX1Q8IWV1 398 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 CISD2Q8N5K1 135 aaKnown RBP9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF433Q8N7K0 673 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF283Q8N7M2 679 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ZIC4Q8N9L1 334 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 C19orf18Q8NEA5 215 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 OR13C3Q8NGS6 347 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 CHPT1Q8WUD6 406 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 COX4I2Q96KJ9 171 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 GPR137Q96N19 417 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 KCNJ15Q99712 375 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 HES7Q9BYE0 225 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 SLC6A15Q9H2J7 730 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 SLCO5A1Q9H2Y9 848 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 NEK6Q9HC98 313 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms