RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CKMP06732 381 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 CTSHP09668 335 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 DANCRP0C864 163 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 GABRR1P24046 479 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 CLDN2P57739 230 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 POLR2LP62875 67 aaKnown RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 MRPS11P82912 194 aaKnown RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 PMPCAQ10713 525 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 Q6ZVL8 140 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 HSD11B1LQ7Z5J1 315 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 GRASPQ7Z6J2 395 aaPredicted RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF676Q8N7Q3 588 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 BHLHE23Q8NDY6 225 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 LFNGQ8NES3 379 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 ROBO4Q8WZ75 1007 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 NELFAQ9H3P2 528 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 USP36Q9P275 1121 aaKnown RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 MRM2Q9UI43 246 aaKnown RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 MRPS18CQ9Y3D5 142 aaKnown RBP12.44□□□□□ -0.42
HDAC1-206ENST00000476391 ATG4BQ9Y4P1 393 aa12.44□□□□□ -0.42
HDAC1-206ENST00000476391 ABHD16AO95870 558 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 GCGP01275 180 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 CTSAP10619 480 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 CXCR1P25024 350 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 RAB32Q13637 225 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 ARHGAP11BQ3KRB8 267 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 LRRC73Q5JTD7 316 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 RPUSD3Q6P087 351 aaKnown RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 GLYATL1Q969I3 302 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 NMNAT2Q9BZQ4 307 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 SPHK2Q9NRA0 654 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 IER3IP1Q9Y5U9 82 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 SYNDIG1LA6NDD5 238 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 M0QZK8 103 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 LEFTY2O00292 366 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 CYB5BO43169 146 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 NME2P1O60361 137 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 GGCTO75223 188 aaKnown RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 LMO1P25800 156 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 REEP5Q00765 189 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF616Q08AN1 781 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 LSRQ86X29 649 aaPredicted RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 KDM8Q8N371 416 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 KREMEN2Q8NCW0 462 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 OR14K1Q8NGZ2 314 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 OR51F2Q8NH61 342 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 ABHD5Q8WTS1 349 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF587Q96SQ5 575 aaPredicted RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 TCEAL2Q9H3H9 227 aaPredicted RBP12.43□□□□□ -0.42
HDAC1-206ENST00000476391 PRDM7Q9NQW5 492 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 SLC2A4RGQ9NR83 387 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 PADI3Q9ULW8 664 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 HS3ST3B1Q9Y662 390 aa12.43□□□□□ -0.42
HDAC1-206ENST00000476391 A0A1B0GVT2 93 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 NPSP0C0P6 89 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 TBPP20226 339 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 GRPRP30550 384 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 TAGLN2P37802 199 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 NPY4RP50391 375 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SUCLG1P53597 346 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ERVFRD-1P60508 538 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 RASGEF1BQ0VAM2 473 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 IL15RAQ13261 267 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 MRPL52Q86TS9 123 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF101Q8IZC7 436 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SLC16A11Q8NCK7 471 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF385AQ96PM9 386 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 LMF1Q96S06 567 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 CCNL2Q96S94 520 aaPredicted RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SLC26A1Q9H2B4 701 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 KCNK6Q9Y257 313 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 FBXO7Q9Y3I1 522 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 A0A0G2JN53 185 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 FEZF1A0PJY2 475 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 NUDT21O43809 227 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 RAMP1O60894 148 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 APBB3O95704 486 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 MRPL2Q5T653 305 aaKnown RBP12.42□□□□□ -0.42
HDAC1-206ENST00000476391 LINC01590Q5TEZ4 76 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF343Q6P1L6 599 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 ZNF793Q6ZN11 406 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 TMEM183AQ8IXX5 376 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 OR51A4Q8NGJ6 313 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 OR10AC1Q8NH08 325 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 FRZBQ92765 325 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 SHDQ96IW2 340 aa12.42□□□□□ -0.42
HDAC1-206ENST00000476391 MRGPRX3Q96LB0 322 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms