RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 NRIP3Q9NQ35 241 aa19.12■□□□□ 0.65
USP42-205ENST00000465073 VSX1Q9NZR4 365 aaPredicted RBP19.12■□□□□ 0.65
USP42-205ENST00000465073 IL20RAQ9UHF4 553 aa19.12■□□□□ 0.65
USP42-205ENST00000465073 ENPP4Q9Y6X5 453 aa19.12■□□□□ 0.65
USP42-205ENST00000465073 CEACAM18A8MTB9 384 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 TMPRSS2O15393 492 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 SERPINA1P01009 418 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 PPIAL4GP0DN37 164 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 H2AFXP16104 143 aaPredicted RBP19.11■□□□□ 0.65
USP42-205ENST00000465073 KCNMB1Q16558 191 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 ADCK1Q86TW2 530 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 OR5AS1Q8N127 324 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 FAM46AQ96IP4 442 aaKnown RBP19.11■□□□□ 0.65
USP42-205ENST00000465073 DUX5Q96PT3 197 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 GPX7Q96SL4 187 aaPredicted RBP19.11■□□□□ 0.65
USP42-205ENST00000465073 HOPXQ9BPY8 73 aaPredicted RBP19.11■□□□□ 0.65
USP42-205ENST00000465073 ZNF696Q9H7X3 374 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 ARMCX1Q9P291 453 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 SIGLEC7Q9Y286 467 aa19.11■□□□□ 0.65
USP42-205ENST00000465073 PKD1L1Q8TDX9 2849 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 A0A1W2PRQ8 180 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 RER1O15258 196 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 CD80P33681 288 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 SRP9P49458 86 aaKnown RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 DGCR6Q14129 220 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 HLXQ14774 488 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 OTPQ5XKR4 325 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 OR2T2Q6IF00 324 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 SLC25A28Q96A46 364 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 APOBEC3DQ96AK3 386 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 MEGF10Q96KG7 1140 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 C1orf147Q96MC9 270 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 ZNF582Q96NG8 517 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 SSBP3Q9BWW4 388 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 C1QTNF5Q9BXJ0 243 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 MS4A7Q9GZW8 240 aaPredicted RBP19.1■□□□□ 0.65
USP42-205ENST00000465073 PTTG3PQ9NZH4 202 aa19.1■□□□□ 0.65
USP42-205ENST00000465073 CLDN34H7C241 214 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 H1F0P07305 194 aaKnown RBP19.09■□□□□ 0.65
USP42-205ENST00000465073 DBHP09172 617 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 BTNL3Q6UXE8 466 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 LRRN1Q6UXK5 716 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 TSEN54Q7Z6J9 526 aaKnown RBP19.09■□□□□ 0.65
USP42-205ENST00000465073 OR52E2Q8NGJ4 325 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 ZNF48Q96MX3 618 aaPredicted RBP19.09■□□□□ 0.65
USP42-205ENST00000465073 NUAK2Q9H093 628 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 TMEM165Q9HC07 324 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 MIOXQ9UGB7 285 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 POLR1DQ9Y2S0 133 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 FAM32AQ9Y421 112 aaKnown RBP19.09■□□□□ 0.65
USP42-205ENST00000465073 IER3IP1Q9Y5U9 82 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 NME4O00746 187 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 SOCS2O14508 198 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 FSTL3O95633 263 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 RNASE1P07998 156 aaKnown RBP19.09■□□□□ 0.65
USP42-205ENST00000465073 MTNR1AP48039 350 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 SLC7A2P52569 658 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 PAX2Q02962 417 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 PGM2L1Q6PCE3 622 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 DPY19L2P2Q6ZN68 376 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 C9orf139Q6ZV77 190 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 GJC3Q8NFK1 279 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 OR10AD1Q8NGE0 317 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 PLEKHA8Q96JA3 519 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 HDHD2Q9H0R4 259 aa19.09■□□□□ 0.65
USP42-205ENST00000465073 NDUFAB1O14561 156 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 SASH3O75995 380 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 TXNDC12O95881 172 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 COX4I1P13073 169 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 RPS2P15880 293 aaKnown RBP19.08■□□□□ 0.64
USP42-205ENST00000465073 CRABP1P29762 137 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 GSK3BP49841 420 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 HIST1H3AP68431 136 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 ZNF181Q2M3W8 571 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 HIST2H3PS2Q5TEC6 136 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 PTCHD4Q6ZW05 846 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 HIST2H3AQ71DI3 136 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 KLBQ86Z14 1044 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 ZNF420Q8TAQ5 688 aaPredicted RBP19.08■□□□□ 0.64
USP42-205ENST00000465073 FAM162AQ96A26 154 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 RSRC1Q96IZ7 334 aaKnown RBP19.08■□□□□ 0.64
USP42-205ENST00000465073 COQ7Q99807 217 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 SLC30A2Q9BRI3 323 aa19.08■□□□□ 0.64
USP42-205ENST00000465073 LRRC30A6NM36 301 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 IMPA2O14732 288 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 CYB5R3P00387 301 aaPredicted RBP19.07■□□□□ 0.64
USP42-205ENST00000465073 CDKN2AP42771 156 aaKnown RBP19.07■□□□□ 0.64
USP42-205ENST00000465073 OMPP47874 163 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 RPS6KA3P51812 740 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 GNB2P62879 340 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 IL13RA1P78552 427 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 FGD3Q5JSP0 725 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 DNM1P34Q6PK57 102 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 PARP8Q8N3A8 854 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 RAB40AQ8WXH6 277 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 UPRTQ96BW1 309 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 EFCAB1Q9HAE3 211 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 KRCC1Q9NPI7 259 aaPredicted RBP19.07■□□□□ 0.64
USP42-205ENST00000465073 RPS6KA6Q9UK32 745 aa19.07■□□□□ 0.64
USP42-205ENST00000465073 POM121CA8CG34 1229 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms