RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 LRRC58Q96CX6 371 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 FBXO17Q96EF6 278 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 VSIG2Q96IQ7 327 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 FCRL1Q96LA6 429 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 C7orf50Q9BRJ6 194 aaKnown RBP3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 SPZ1Q9BXG8 430 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 Q9H3A6 140 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 WDR55Q9H6Y2 383 aaPredicted RBP3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 ISG20L2Q9H9L3 353 aaKnown RBP3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 KCNJ16Q9NPI9 418 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF581Q9P0T4 197 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 NAGKQ9UJ70 344 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 CBY1Q9Y3M2 126 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 OR51B2Q9Y5P1 312 aa3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 POLR3AO14802 1390 aaPredicted RBP3.97□□□□□ -1.77
TM9SF3-202ENST00000443638 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 DFFAO00273 331 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 TOX3O15405 576 aaPredicted RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 RCBTB2O95199 551 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 OR8U9P0C7N5 309 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 OCMP0CE72 109 aaPredicted RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 HLA-GP17693 338 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 HRH1P35367 487 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 RANBP1P43487 201 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 MLF1P58340 268 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 MRPS15P82914 257 aaKnown RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 IFFO1Q0D2I5 559 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 AQP6Q13520 282 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 SLC1A5Q15758 541 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 EXOC3L4Q17RC7 722 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 KRTAP24-1Q3LI83 254 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 PAGE3Q5JUK9 113 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 AP1ARQ63HQ0 302 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 C12orf54Q6X4T0 127 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 SSX6Q7RTT6 188 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 THOC6Q86W42 341 aaKnown RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 CRLF3Q8IUI8 442 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 FBXO16Q8IX29 292 aaPredicted RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 TMEM252Q8N6L7 170 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 OR8U1Q8NH10 309 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 GTSF1Q8WW33 167 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 TMEM230Q96A57 120 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 SGTBQ96EQ0 304 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 KIR2DL4Q99706 377 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 ARHGDIGQ99819 225 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 MICU1Q9BPX6 476 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 UQCC2Q9BRT2 126 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 CNPY3Q9BT09 278 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 ZDHHC11Q9H8X9 412 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 SLC38A10Q9HBR0 1119 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 ISYNA1Q9NPH2 558 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 TREX1Q9NSU2 369 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 SLC39A1Q9NY26 324 aa3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 APOBEC3BQ9UH17 382 aaKnown RBP3.96□□□□□ -1.78
TM9SF3-202ENST00000443638 KRTAP4-16G5E9R7 235 aaPredicted RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 AQP9O43315 295 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 EDIL3O43854 480 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 GALR3O60755 368 aaPredicted RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 AHSA1O95433 338 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 IGHV3-23P01764 117 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 GKN3PP0CG01 181 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CALM1P0DP23 149 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CALM2P0DP24 149 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CALM3P0DP25 149 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 FMO3P31513 532 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 MAGEA3P43357 314 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CDC34P49427 236 aaPredicted RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 XKP51811 444 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 SLC25A1P53007 311 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 FGF8P55075 233 aaPredicted RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 TIMM23BQ5SRD1 257 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 FAM151BQ6UXP7 276 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 AHSA2Q719I0 299 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 ZNF589Q86UQ0 364 aaPredicted RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CA13Q8N1Q1 262 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 NPWQ8N729 165 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 OR8J2Q8NGG1 315 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 OR6X1Q8NH79 312 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 OR51E1Q8TCB6 317 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 C17orf50Q8WW18 174 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 RCN3Q96D15 328 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 DUX3Q96PT4 197 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 TSNAXQ99598 290 aaKnown RBP3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CIB1Q99828 191 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 COPS4Q9BT78 406 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 OSBPL11Q9BXB4 747 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 BEX2Q9BXY8 128 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 AIG1Q9NVV5 245 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 IL20Q9NYY1 176 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 CES1P1Q9UKY3 287 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 ASF1AQ9Y294 204 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 RLFQ13129 1914 aa3.95□□□□□ -1.78
TM9SF3-202ENST00000443638 A0A0A6YYH2 397 aa3.94□□□□□ -1.78
TM9SF3-202ENST00000443638 A6NJ64 397 aa3.94□□□□□ -1.78
TM9SF3-202ENST00000443638 HIDE1A8MVS5 230 aa3.94□□□□□ -1.78
TM9SF3-202ENST00000443638 H7C2Y5 167 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms