RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 NUAK2Q9H093 628 aa17.45■□□□□ 0.38
CPNE1-219ENST00000440240 GCM1Q9NP62 436 aa17.45■□□□□ 0.38
CPNE1-219ENST00000440240 KRCC1Q9NPI7 259 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-219ENST00000440240 IER3IP1Q9Y5U9 82 aa17.45■□□□□ 0.38
CPNE1-219ENST00000440240 F5H0A9 414 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 SOCS2O14508 198 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 RHCEP18577 417 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 PRTN3P24158 256 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 CRABP1P29762 137 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 RPS6KA3P51812 740 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 HNRNPA0Q13151 305 aaKnown RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 C8orf82Q6P1X6 216 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 PGM2L1Q6PCE3 622 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 HACD2Q6Y1H2 254 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 DOK3Q7L591 496 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 TSEN54Q7Z6J9 526 aaKnown RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 SIGLECL1Q8N7X8 197 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 OR8G5Q8NG78 346 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 APOBEC3DQ96AK3 386 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 ZNF582Q96NG8 517 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 KCTD14Q9BQ13 255 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 CCDC134Q9H6E4 229 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 ZMAT3Q9HA38 289 aaKnown RBP17.44■□□□□ 0.38
CPNE1-219ENST00000440240 OR5V1Q9UGF6 321 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 AURKCQ9UQB9 309 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 LRCH1Q9Y2L9 728 aa17.44■□□□□ 0.38
CPNE1-219ENST00000440240 RER1O15258 196 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 TXNDC12O95881 172 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 WNT2P09544 360 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 HKR1P10072 659 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 OMPP47874 163 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 SRP9P49458 86 aaKnown RBP17.43■□□□□ 0.38
CPNE1-219ENST00000440240 ERFP50548 548 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 SEC61A1P61619 476 aaKnown RBP17.43■□□□□ 0.38
CPNE1-219ENST00000440240 HLXQ14774 488 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-219ENST00000440240 FGD3Q5JSP0 725 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 OTPQ5XKR4 325 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 DNM1P34Q6PK57 102 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 OR5AS1Q8N127 324 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 NDUFAF4Q9P032 175 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 ZNF69Q9UC07 566 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 IL20RAQ9UHF4 553 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 POLR1DQ9Y2S0 133 aa17.43■□□□□ 0.38
CPNE1-219ENST00000440240 DBHP09172 617 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 NCK1P16333 377 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 CENPAP49450 140 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 MMP16P51512 607 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 HIST1H3AP68431 136 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 KLF17Q5JT82 389 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-219ENST00000440240 HIST2H3PS2Q5TEC6 136 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 OR2T2Q6IF00 324 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 HIST2H3AQ71DI3 136 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 RSRC1Q96IZ7 334 aaKnown RBP17.42■□□□□ 0.38
CPNE1-219ENST00000440240 COQ7Q99807 217 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 ZNF747Q9BV97 191 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 HDHD2Q9H0R4 259 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 PTTG3PQ9NZH4 202 aa17.42■□□□□ 0.38
CPNE1-219ENST00000440240 UNC119BA6NIH7 251 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 LRRC30A6NM36 301 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 CEACAM18A8MTB9 384 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 FSTL3O95633 263 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 PPIAL4GP0DN37 164 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 RBMXP38159 391 aaKnown RBP17.41■□□□□ 0.38
CPNE1-219ENST00000440240 CDKN2AP42771 156 aaKnown RBP17.41■□□□□ 0.38
CPNE1-219ENST00000440240 NUDT2P50583 147 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 PAX8Q06710 450 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 KRT72Q14CN4 511 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 SMARCD3Q6STE5 483 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 SHISA2Q6UWI4 295 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 BTNL3Q6UXE8 466 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 PTCHD4Q6ZW05 846 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 PLEKHA8Q96JA3 519 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 MEGF10Q96KG7 1140 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 SSBP3Q9BWW4 388 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-219ENST00000440240 MS4A7Q9GZW8 240 aaPredicted RBP17.41■□□□□ 0.38
CPNE1-219ENST00000440240 TMEM165Q9HC07 324 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 MIOXQ9UGB7 285 aa17.41■□□□□ 0.38
CPNE1-219ENST00000440240 SAMD4AQ9UPU9 718 aaKnown RBP17.41■□□□□ 0.38
CPNE1-219ENST00000440240 IMPA2O14732 288 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 GMNNO75496 209 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 SELEP16581 610 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 BAMBIQ13145 260 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 ZNF181Q2M3W8 571 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 GLYATQ6IB77 296 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 LRRN1Q6UXK5 716 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 OR10AD1Q8NGE0 317 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 OR52E2Q8NGJ4 325 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 ZNF420Q8TAQ5 688 aaPredicted RBP17.4■□□□□ 0.38
CPNE1-219ENST00000440240 C7orf34Q96L11 122 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 SLC30A2Q9BRI3 323 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 HCAR1Q9BXC0 346 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 DCAF13Q9NV06 445 aaKnown RBP17.4■□□□□ 0.38
CPNE1-219ENST00000440240 TMEM100Q9NV29 134 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 ABCD2Q9UBJ2 740 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 LHFPL6Q9Y693 200 aa17.4■□□□□ 0.38
CPNE1-219ENST00000440240 TRBV4-1A0A0J9YWV2 114 aa17.39■□□□□ 0.37
CPNE1-219ENST00000440240 DNAJC9-AS1A6NH13 148 aa17.39■□□□□ 0.37
CPNE1-219ENST00000440240 IQCF6A8MYZ5 107 aa17.39■□□□□ 0.37
CPNE1-219ENST00000440240 RPS2P15880 293 aaKnown RBP17.39■□□□□ 0.37
CPNE1-219ENST00000440240 CD80P33681 288 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms