RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 IL20Q9NYY1 176 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 IL19Q9UHD0 177 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 IL20RAQ9UHF4 553 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 KCNG2Q9UJ96 466 aa12.35□□□□□ -0.43
NIF3L1-205ENST00000409588 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 UBOX5O94941 541 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 FAM107AO95990 144 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 CALB2P22676 271 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 MAGEA2P43356 314 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 GYS2P54840 703 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 COX10Q12887 443 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 TRIM25Q14258 630 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 CCDC92Q53HC0 331 aaPredicted RBP12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 LEG1Q6P5S2 330 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 FBXW12Q6X9E4 464 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 DHFR2Q86XF0 187 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 OR6V1Q8N148 313 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 FITM2Q8N6M3 262 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 OR52L1Q8NGH7 329 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 CMBLQ96DG6 245 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 NMNAT3Q96T66 252 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 C1orf21Q9H246 121 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 TREM2Q9NZC2 230 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 PURGQ9UJV8 347 aaKnown RBP12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 POLR1DQ9Y2S0 133 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 STARD10Q9Y365 291 aa12.34□□□□□ -0.43
NIF3L1-205ENST00000409588 SVEP1Q4LDE5 3571 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 IGLV1-36A0A0B4J1U3 117 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 ZSCAN5BA6NJL1 495 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 J3QLI3 93 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 RER1O15258 196 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 MPZL1O95297 269 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 HIST1H1CP16403 213 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 SELEP16581 610 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 CENPAP49450 140 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 TNFAIP6P98066 277 aaPredicted RBP12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF620Q6ZNG0 422 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2AJ1Q8NGZ0 328 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 PRPF19Q9UMS4 504 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 BAIAP2Q9UQB8 552 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 WIPI2Q9Y4P8 454 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 V9GYQ6 96 aa12.33□□□□□ -0.44
NIF3L1-205ENST00000409588 PPIAL4EA0A075B759 164 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 PPIAL4CA0A0B4J2A2 164 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 PPIAL4DF5H284 164 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 TCF21O43680 179 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 PPIAL4FP0DN26 164 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 BLVRAP53004 296 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 MVKQ03426 396 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 PGBD2Q6P3X8 592 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 RASSF6Q6ZTQ3 369 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 CCDC197Q8NCU1 140 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 SLC26A10Q8NG04 563 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2T4Q8NH00 348 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 OR4K13Q8NH42 304 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF582Q96NG8 517 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 MSL2Q9HCI7 577 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 CYB5R1Q9UHQ9 305 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 LYVE1Q9Y5Y7 322 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 LHFPL6Q9Y693 200 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 CDH10Q9Y6N8 788 aa12.32□□□□□ -0.44
NIF3L1-205ENST00000409588 CUBNO60494 3623 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 A0A0G2JMP0 313 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 A0A0X1KG70 313 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 DCTN6O00399 190 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 WNT9BO14905 357 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 CCNB2O95067 398 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 FSTL3O95633 263 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 PNPP00491 289 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF823P16415 610 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 FAHD2BQ6P2I3 314 aaPredicted RBP12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 COLCA1Q6ZS62 124 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 KLHL36Q8N4N3 616 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 SPICQ8N5J4 248 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 ZNF283Q8N7M2 679 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 OR8G5Q8NG78 346 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 OR2Z1Q8NG97 314 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 OR4M2Q8NGB6 313 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 OR52E2Q8NGJ4 325 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 FAHD2AQ96GK7 314 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 TSSK2Q96PF2 358 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 C1QTNF5Q9BXJ0 243 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 NARFLQ9H6Q4 476 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 RPRD1BQ9NQG5 326 aaKnown RBP12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 NOP16Q9Y3C1 178 aaKnown RBP12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 NPTNQ9Y639 398 aa12.31□□□□□ -0.44
NIF3L1-205ENST00000409588 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
NIF3L1-205ENST00000409588 PLPP2O43688 288 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms