RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
CXCL12-205ENST00000395794 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 CDH10Q9Y6N8 788 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 RTTNQ86VV8 2226 aa11.68□□□□□ -0.54
CXCL12-205ENST00000395794 FBN1P35555 2871 aaKnown RBP11.67□□□□□ -0.54
CXCL12-205ENST00000395794 IGLV1-36A0A0B4J1U3 117 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 TRAV20A0A0B4J274 112 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 ISPDA4D126 451 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 FAM157AC9JC47 383 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 DYNC1I1O14576 645 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 GPANK1O95872 356 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 CD55P08174 381 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 RAC2P15153 192 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 ZNF823P16415 610 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 KITLGP21583 273 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 HMGA2P52926 109 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 LMO4P61968 165 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.67□□□□□ -0.54
CXCL12-205ENST00000395794 ECH1Q13011 328 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 CDK5R2Q13319 367 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 TRIM25Q14258 630 aaKnown RBP11.67□□□□□ -0.54
CXCL12-205ENST00000395794 MEP1BQ16820 701 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 CLEC12AQ5QGZ9 265 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 SLC35F1Q5T1Q4 408 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 HAVCR1Q96D42 359 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 PITX2Q99697 317 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 COQ7Q99807 217 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 REEP1Q9H902 201 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 PRPF19Q9UMS4 504 aaKnown RBP11.67□□□□□ -0.54
CXCL12-205ENST00000395794 WIPI2Q9Y4P8 454 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 LYVE1Q9Y5Y7 322 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 LHFPL6Q9Y693 200 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 CACNG2Q9Y698 323 aa11.67□□□□□ -0.54
CXCL12-205ENST00000395794 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
CXCL12-205ENST00000395794 DCTN6O00399 190 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 UBOX5O94941 541 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 DBHP09172 617 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 HIST1H3AP68431 136 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 COX10Q12887 443 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 TMEM255AQ5JRV8 349 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 HIST2H3PS2Q5TEC6 136 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 LCN8Q6JVE9 175 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 SLC27A4Q6P1M0 643 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
CXCL12-205ENST00000395794 CORO6Q6QEF8 472 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 HIST2H3AQ71DI3 136 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 ZBTB46Q86UZ6 589 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 ATG16L2Q8NAA4 619 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 AQP11Q8NBQ7 271 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 PROKR2Q8NFJ6 384 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 SLC26A10Q8NG04 563 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 OR9Q2Q8NGE9 314 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 OR2T4Q8NH00 348 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 ZNF582Q96NG8 517 aaPredicted RBP11.66□□□□□ -0.54
CXCL12-205ENST00000395794 HCAR1Q9BXC0 346 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 POFUT1Q9H488 388 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 EGLN3Q9H6Z9 239 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 TBC1D23Q9NUY8 699 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 PTTG3PQ9NZH4 202 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 KCNG2Q9UJ96 466 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 DNHD1Q96M86 4753 aa11.66□□□□□ -0.54
CXCL12-205ENST00000395794 ATRQ13535 2644 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 OR6C68A6NDL8 312 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 TCF21O43680 179 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 GASTP01350 101 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 MAGEA2P43356 314 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 MALLQ13021 153 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 OR2T5Q6IEZ7 315 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 RASSF6Q6ZTQ3 369 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 LINC00346Q8IVM7 164 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 OR2T29Q8NH02 315 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 ST7LQ8TDW4 575 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 ATF6BQ99941 703 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 FN3KQ9H479 309 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 IL20Q9NYY1 176 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 UBAP1Q9NZ09 502 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 IL19Q9UHD0 177 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 PCDHB10Q9UN67 800 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 BAIAP2Q9UQB8 552 aa11.65□□□□□ -0.54
CXCL12-205ENST00000395794 SAMHD1Q9Y3Z3 626 aaKnown RBP11.65□□□□□ -0.54
CXCL12-205ENST00000395794 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 A0A0G2JMP0 313 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 A0A0X1KG70 313 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 F5H5K5 113 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 PNPP00491 289 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 SBK2P0C263 348 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 SELEP16581 610 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 HLXQ14774 488 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-205ENST00000395794 MICAQ29983 383 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 SLC18B1Q6NT16 456 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 FBXW12Q6X9E4 464 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 CFAP77Q6ZQR2 320 aa11.64□□□□□ -0.55
CXCL12-205ENST00000395794 ZNF771Q7L3S4 317 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms