RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 HMGA2P52926 109 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 COX10Q12887 443 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 CCDC92Q53HC0 331 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 FBXW12Q6X9E4 464 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 ZBTB46Q86UZ6 589 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 KLHL36Q8N4N3 616 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 OR2Z1Q8NG97 314 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 ZNF418Q8TF45 676 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 GTF3AQ92664 365 aaKnown RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 ZNF582Q96NG8 517 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 TRIM15Q9C019 465 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 METTL17Q9H7H0 456 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 SRA1Q9HD15 236 aaKnown RBP16.01■□□□□ 0.15
TMEM53-201ENST00000372235 ACTR3BQ9P1U1 418 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 PCDHB10Q9UN67 800 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 STARD10Q9Y365 291 aa16.01■□□□□ 0.15
TMEM53-201ENST00000372235 PPIAL4EA0A075B759 164 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 PPIAL4CA0A0B4J2A2 164 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 PPIAL4DF5H284 164 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 RER1O15258 196 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 PLPP2O43688 288 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 DEAF1O75398 565 aaPredicted RBP16■□□□□ 0.15
TMEM53-201ENST00000372235 FOXH1O75593 365 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 PPIAL4FP0DN26 164 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 HIST1H3AP68431 136 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 TMEM155Q4W5P6 130 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 HIST2H3PS2Q5TEC6 136 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 DCAF12L2Q5VW00 463 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 HIST2H3AQ71DI3 136 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 OR13G1Q8NGZ3 307 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 JMJD8Q96S16 334 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 NMNAT3Q96T66 252 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 GPA33Q99795 319 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 HCAR1Q9BXC0 346 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 OCEL1Q9H607 264 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 MAGIXQ9H6Y5 334 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 G6PC2Q9NQR9 355 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 TMEM106BQ9NUM4 274 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 PPP1R3CQ9UQK1 317 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 CUBNO60494 3623 aa16■□□□□ 0.15
TMEM53-201ENST00000372235 IGLV1-36A0A0B4J1U3 117 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 HLA-DQA2P01906 255 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 HIST1H1CP16403 213 aaKnown RBP15.99■□□□□ 0.15
TMEM53-201ENST00000372235 ZNF823P16415 610 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 SRP9P49458 86 aaKnown RBP15.99■□□□□ 0.15
TMEM53-201ENST00000372235 MALLQ13021 153 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 GK3PQ14409 553 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 ZNF620Q6ZNG0 422 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 OR6V1Q8N148 313 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 MUC20Q8N307 709 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-201ENST00000372235 ZNF283Q8N7M2 679 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 OR8G5Q8NG78 346 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 NANPQ8TBE9 248 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 RPRD1BQ9NQG5 326 aaKnown RBP15.99■□□□□ 0.15
TMEM53-201ENST00000372235 ARL8BQ9NVJ2 186 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 NOP16Q9Y3C1 178 aaKnown RBP15.99■□□□□ 0.15
TMEM53-201ENST00000372235 CACNG2Q9Y698 323 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 COL6A5A8TX70 2615 aa15.99■□□□□ 0.15
TMEM53-201ENST00000372235 TNFRSF11BO00300 401 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 TMEM255AQ5JRV8 349 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 USP43Q70EL4 1123 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 SLC26A10Q8NG04 563 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 OR2T4Q8NH00 348 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 OR4K13Q8NH42 304 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 TSSK2Q96PF2 358 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 PITX2Q99697 317 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 ATF6BQ99941 703 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 BAIAP2Q9UQB8 552 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 LHFPL6Q9Y693 200 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 CDH10Q9Y6N8 788 aa15.98■□□□□ 0.15
TMEM53-201ENST00000372235 HOXB6P17509 224 aaKnown RBP15.97■□□□□ 0.15
TMEM53-201ENST00000372235 MSX2P35548 267 aaPredicted RBP15.97■□□□□ 0.15
TMEM53-201ENST00000372235 PGBD2Q6P3X8 592 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 C1orf87Q8N0U7 546 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 OR52E2Q8NGJ4 325 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 OR4C15Q8NGM1 316 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 SPTSSAQ969W0 71 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 NSL1Q96IY1 281 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 IL20Q9NYY1 176 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 UBAP1Q9NZ09 502 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 LYVE1Q9Y5Y7 322 aa15.97■□□□□ 0.15
TMEM53-201ENST00000372235 LRRC30A6NM36 301 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 IQCF6A8MYZ5 107 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 B2RBV5 119 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 DCTN6O00399 190 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 CCNB2O95067 398 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 IGHV2-70P01814 119 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 SBK2P0C263 348 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 CALB2P22676 271 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 MAGEA2P43356 314 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 BLVRAP53004 296 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 TPTEP56180 551 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 BTG1P62324 171 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.96■□□□□ 0.15
TMEM53-201ENST00000372235 FAM98BQ52LJ0 330 aaKnown RBP15.96■□□□□ 0.15
TMEM53-201ENST00000372235 SLC18B1Q6NT16 456 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 COLCA1Q6ZS62 124 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 RASSF6Q6ZTQ3 369 aa15.96■□□□□ 0.15
TMEM53-201ENST00000372235 C1QL2Q7Z5L3 287 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms