RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 C4orf36Q96KX1 117 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 TNFRSF13CQ96RJ3 184 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 RBM24Q9BX46 236 aaKnown RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 CACNG6Q9BXT2 260 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 PRRG4Q9BZD6 226 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 RTN4RQ9BZR6 473 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 CLEC4MQ9H2X3 399 aaPredicted RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 PLEKHA1Q9HB21 404 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 GPN1Q9HCN4 374 aaPredicted RBP9.21□□□□□ -0.94
COL5A1-202ENST00000371820 JKAMPQ9P055 326 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF281Q9Y2X9 895 aa9.21□□□□□ -0.94
COL5A1-202ENST00000371820 A0A0G2JMP0 313 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 TEX13CA0A0J9YWL9 993 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 A0A0X1KG70 313 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FAM183AA6NL82 134 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GJE1A6NN92 205 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 C17orf51A8MQB3 221 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GABARAPH6UMI1 98 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GMFGO60234 142 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 PIP5K1CO60331 668 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GLCEO94923 617 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 NUDT14O95848 222 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 IFNA7P01567 189 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 UBL4AP11441 157 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 EPXP11678 715 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FUT1P19526 365 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 SRMP19623 302 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 M6PRP20645 277 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 HTR2AP28223 471 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ADH6P28332 368 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 RCVRNP35243 200 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 THBS2P35442 1172 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 SLC6A8P48029 635 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GDI2P50395 445 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 P2RX1P51575 399 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CAPZA1P52907 286 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CAV3P56539 151 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 HOXC5Q00444 222 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF85Q03923 595 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CRMP1Q14194 572 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 PLPPR5Q32ZL2 321 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ELFN2Q5R3F8 820 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 METTL11BQ5VVY1 283 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GPR139Q6DWJ6 353 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 WBP2NLQ6ICG8 309 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 WDR88Q6ZMY6 472 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ESPNLQ6ZVH7 1005 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 OLIG3Q7RTU3 272 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FAM220AQ7Z4H9 259 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 SLC35F2Q8IXU6 374 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GTPBP8Q8N3Z3 284 aaPredicted RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF614Q8N883 585 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 BBS1Q8NFJ9 593 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 OR4M2Q8NGB6 313 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 OR52E2Q8NGJ4 325 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF671Q8TAW3 534 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ZNF431Q8TF32 576 aaPredicted RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FCAMRQ8WWV6 532 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CNOT9Q92600 299 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 NINJ1Q92982 152 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 KISS1RQ969F8 398 aaPredicted RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FYTTD1Q96QD9 318 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 DCLRE1CQ96SD1 692 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 GPX7Q96SL4 187 aaPredicted RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 OR51J1Q9H342 316 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 FANCFQ9NPI8 374 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 EXOSC3Q9NQT5 275 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CRIM1Q9NZV1 1036 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 CHRNA9Q9UGM1 479 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 ST6GALNAC2Q9UJ37 374 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 SCP2D1Q9UJQ7 156 aa9.2□□□□□ -0.94
COL5A1-202ENST00000371820 MCTS1Q9ULC4 181 aaKnown RBP9.2□□□□□ -0.94
COL5A1-202ENST00000371820 A0A1W2PNV4 684 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 A8MXE2 369 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 EIF1AYO14602 144 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 CTAG2O75638 210 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 OR7A10O76100 309 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 SYNGR4O95473 234 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 PPP1R3DO95685 299 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 TGM6O95932 706 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 HIST1H2ABP04908 130 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 GKN3PP0CG01 181 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 EDNRAP25101 427 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 RPL4P36578 427 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 ACAA2P42765 397 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 EIF1AXP47813 144 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 AGFG1P52594 562 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 CLDN15P56746 228 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 OR12D2P58182 307 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 RAB14P61106 215 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 RAC1P63000 192 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 SSBP1Q04837 148 aaKnown RBP9.19□□□□□ -0.94
COL5A1-202ENST00000371820 FOXF2Q12947 444 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 ESCO2Q56NI9 601 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 HIST3H2AQ7L7L0 130 aa9.19□□□□□ -0.94
COL5A1-202ENST00000371820 KRT74Q7RTS7 529 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms