RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 SUB1P53999 127 aaKnown RBP eCLIP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF766Q5HY98 468 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 RNLSQ5VYX0 342 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 LCN10Q6JVE6 187 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM81Q6P7N7 255 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 RBMS3Q6XE24 437 aaKnown RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 B3GLCTQ6Y288 498 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 Q8IYB0 196 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 KISS1RQ969F8 398 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 SEH1LQ96EE3 360 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 IKZF5Q9H5V7 419 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 OSGIN1Q9UJX0 560 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 A4GNTQ9UNA3 340 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1B0GTQ1 180 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 HPP00738 406 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 BCKDHBP21953 392 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 FUT6P51993 359 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 CAV3P56539 151 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 SCAND1P57086 179 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 FUT7Q11130 342 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 CDK5R1Q15078 307 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 COL13A1Q5TAT6 717 aaPredicted RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 KIRREL2Q6UWL6 708 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 KANSL1Q7Z3B3 1105 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 DNAJC5GQ8N7S2 189 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 PLPP5Q8NEB5 264 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 OR5M1Q8NGP8 315 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 OR1L3Q8NH93 324 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF649Q9BS31 505 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 C20orf85Q9H1P6 137 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 HRASLSQ9HDD0 168 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 FBXO8Q9NRD0 319 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 CLEC1BQ9P126 229 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 CTSFQ9UBX1 484 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 B9D1Q9UPM9 204 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 SIPA1L1O43166 1804 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF816-ZNF321PA0A0X1KG74 233 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1W2PQD3 144 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 TUBG1P23258 451 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 PNLIPRP3Q17RR3 467 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 C6orf183Q5T699 404 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 D2HGDHQ8N465 521 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 FAM71CQ8NEG0 241 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 OR51F2Q8NH61 342 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 PDCD1LG2Q9BQ51 273 aa4.4□□□□□ -1.7
SCN3A-202ENST00000360093 ZFC3H1O60293 1989 aaKnown RBP4.4□□□□□ -1.7
SCN3A-202ENST00000360093 SEC16AO15027 2179 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TDRD6O60522 2096 aaKnown RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SBF1O95248 1867 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 A0A1W2PNR3 127 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 KLK10O43240 276 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CXCL13O43927 109 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 DFFBO76075 338 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 GRPP07492 148 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CSF3P09919 207 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CHATP28329 748 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SRD5A2P31213 254 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 THBS4P35443 961 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TGM4P49221 684 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SRP9P49458 86 aaKnown RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TPBGQ13641 420 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CD276Q5ZPR3 534 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ZNF793Q6ZN11 406 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ZDHHC23Q8IYP9 409 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CORO2AQ92828 525 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ARPC5LQ9BPX5 153 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 PBOV1Q9GZY1 135 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SPNS1Q9H2V7 528 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ZNF768Q9H5H4 540 aaKnown RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 GPR84Q9NQS5 396 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ATP23Q9Y6H3 246 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CTSVO60911 334 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 APOC3P02656 99 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 HMGA2P52926 109 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 CLDN12P56749 244 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 PAQR6Q6TCH4 344 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ZNF419Q96HQ0 510 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SLC17A5Q9NRA2 495 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ASF1BQ9NVP2 202 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 MYOFQ9NZM1 2061 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 IFITM5A6NNB3 132 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 F6UZH7 168 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 FOLR1P15328 257 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 PRKACAP17612 351 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 AADACP22760 399 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 RPS19P39019 145 aaKnown RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 RAC1P63000 192 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 PCK2Q16822 640 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 ATPAF1Q5TC12 328 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 COMMD7Q86VX2 200 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SIAH3Q8IW03 269 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 SLC38A9Q8NBW4 561 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TCEAL2Q9H3H9 227 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 WDR54Q9H977 334 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 GPATCH2Q9NW75 528 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TAS2R4Q9NYW5 299 aa4.4□□□□□ -1.71
SCN3A-202ENST00000360093 OTOL1A6NHN0 477 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-202ENST00000360093 TERTO14746 1132 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms