RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 TXLNGYQ9BZA5 131 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 HTR2CP28335 458 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 FOXA1P55317 472 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 INPP5JQ15735 1006 aaPredicted RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 GRINAQ7Z429 371 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR52N5Q8NH56 324 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 NRIP3Q9NQ35 241 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MYO7AQ13402 2215 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 ZNF789Q5FWF6 425 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MBOAT2Q6ZWT7 520 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 CCDC190Q86UF4 302 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 EDAQ92838 391 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 SLC46A2Q9BY10 475 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 PCNX2A6NKB5 2137 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 INTS1Q8N201 2190 aaKnown RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 KRBA1A5PL33 1030 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 SERINC4A6NH21 518 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 FAM183AA6NL82 134 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 RPLP1P05386 114 aaKnown RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 NAGAP17050 411 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.643e-12■□□□□ 9.5
PCF11-201ENST00000298281 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MFSD4AQ8N468 514 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR5M1Q8NGP8 315 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 WBP2Q969T9 261 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 MRPL37Q9BZE1 423 aaKnown RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 PADI1Q9ULC6 663 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 HS3ST2Q9Y278 367 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 M0R296 226 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR3A1P47881 315 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 TMUB2Q71RG4 321 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 EIF4E3Q8N5X7 224 aaKnown RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR2AK2Q8NG84 335 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR2AE1Q8NHA4 323 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 SGMS2Q8NHU3 365 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 CHAC2Q8WUX2 184 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 BCL7CQ8WUZ0 217 aaPredicted RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 FIZ1Q96SL8 496 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 HINT3Q9NQE9 182 aaKnown RBP11.06□□□□□ -0.64
PCF11-201ENST00000298281 OR1A1Q9P1Q5 309 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 U3KQ87 197 aa11.06□□□□□ -0.64
PCF11-201ENST00000298281 ELK1P19419 428 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 CTSCP53634 463 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 CLEC12BQ2HXU8 276 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 ANKRD16Q6P6B7 361 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 TP53INP2Q8IXH6 220 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 TMIGD2Q96BF3 282 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 MSL2Q9HCI7 577 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 FAM157BP0CG42 384 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 RELAQ04206 551 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 PLK5Q496M5 336 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 OR2G2Q8NGZ5 317 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 OR2T11Q8NH01 316 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 ACTR3CQ9C0K3 210 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 RHOFQ9HBH0 211 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 EXOSC3Q9NQT5 275 aaKnown RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 HCFC1R1Q9NWW0 138 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SLC22A13Q9Y226 551 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 MEIKINA0A087WXM9 373 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 PSMB1P20618 241 aaKnown RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 EXT1Q16394 746 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SIRT6Q8N6T7 355 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 OR5R1Q8NH85 324 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SLC25A21Q9BQT8 299 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 AK3Q9UIJ7 227 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 KLK4Q9Y5K2 254 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 DCTN6O00399 190 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 CACNG3O60359 315 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SEMG1P04279 462 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 CALCBP10092 127 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 Q499Y3 187 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 DPY19L2P2Q6ZN68 376 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 ACOT7LQ6ZUV0 252 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 CLDN22Q8N7P3 220 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 PIGTQ969N2 578 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SIRT5Q9NXA8 310 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 RCE1Q9Y256 329 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 TACR1P25103 407 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 DLX1P56177 255 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 MAT1AQ00266 395 aaKnown RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 PAX5Q02548 391 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 YOD1Q5VVQ6 348 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 STUMQ69YW2 141 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 LGI3Q8N145 548 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SLC25A43Q8WUT9 341 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 FOXC2Q99958 501 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SIAEQ9HAT2 523 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 NOX4Q9NPH5 578 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SERPINE3A8MV23 424 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms