RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 STRADBQ9C0K7 418 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 NDEL1Q9GZM8 345 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 HRH4Q9H3N8 390 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 KCNK15Q9H427 330 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 TMEM27Q9HBJ8 222 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 NXT1Q9UKK6 140 aaKnown RBP4.13□□□□□ -1.75
VPS29-212ENST00000621131 ERVK-19Q9WJR5 959 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 CACNA1EQ15878 2313 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 DSPPQ9NZW4 1301 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 MGAQ8IWI9 3026 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 GOLGA4Q13439 2230 aaKnown RBP4.13□□□□□ -1.75
VPS29-212ENST00000621131 NF1P21359 2839 aa4.13□□□□□ -1.75
VPS29-212ENST00000621131 CABIN1Q9Y6J0 2220 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 A0A1W2PRQ8 180 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 IRGMA1A4Y4 181 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FRG2CA6NGY1 282 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 CPSF4LA6NMK7 179 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 D6RAR5 112 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 H3BN98 237 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FMO6PO60774 539 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 MRPS14O60783 128 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 GCM2O75603 506 aaPredicted RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 OR5F1O95221 314 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ANGPTL1O95841 491 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 C1QCP02747 245 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 KLK3P07288 261 aaPredicted RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 ATP6V1B1P15313 513 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FOLR1P15328 257 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 PRKACGP22612 351 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ELAVL4P26378 380 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 OR1D4P47884 311 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 DAPP51397 102 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 COPZ1P61923 177 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 BTG2P78543 158 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 DCDP81605 110 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 MAT1AQ00266 395 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 MYBPC1Q00872 1141 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FUT5Q11128 374 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 COX10Q12887 443 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 PPP1R8Q12972 351 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 DGCR6Q14129 220 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 IL11RAQ14626 422 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 IRF3Q14653 427 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 NSDHLQ15738 373 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 DUSP7Q16829 419 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 C1orf189Q5VU69 101 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ZNF691Q5VV52 312 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 RHBDD2Q6NTF9 364 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 RPL13AP3Q6NVV1 102 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 TBPL2Q6SJ96 375 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 CASP12Q6UXS9 341 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ZNF730Q6ZMV8 503 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 COMMD2Q86X83 199 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 HOGA1Q86XE5 327 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 CYP4Z2PQ8N1L4 340 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 PARP8Q8N3A8 854 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 AQP11Q8NBQ7 271 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ZBTB44Q8NCP5 570 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 MORN4Q8NDC4 146 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 OR4C15Q8NGM1 316 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 OR5M8Q8NGP6 311 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 OR2AJ1Q8NGZ0 328 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FAM81AQ8TBF8 368 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 TEX47Q8TBZ9 253 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 GNPDA2Q8TDQ7 276 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 MYDGFQ969H8 173 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 SLC35B4Q969S0 331 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 PLEKHA8Q96JA3 519 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 Q96MT0 163 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 MUS81Q96NY9 551 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 MBOAT4Q96T53 435 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 FEVQ99581 238 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ARHGDIGQ99819 225 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 DGCR6LQ9BY27 220 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 GABARAPL3Q9BY60 117 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 RTN4RQ9BZR6 473 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 ZNF350Q9GZX5 532 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 SLC38A1Q9H2H9 487 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 NMNAT1Q9HAN9 279 aaPredicted RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 CLN6Q9NWW5 311 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 UBAP1Q9NZ09 502 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 TMEM9Q9P0T7 183 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 DHCR7Q9UBM7 475 aaKnown RBP4.12□□□□□ -1.75
VPS29-212ENST00000621131 TMEM5Q9Y2B1 443 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 SLC35A3Q9Y2D2 325 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 RALGAPA1Q6GYQ0 2036 aa4.12□□□□□ -1.75
VPS29-212ENST00000621131 COL5A1P20908 1838 aaPredicted RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 IGHV5-10-1A0A0J9YXX1 117 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 C2orf92A0A1B0GVN3 265 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 LNP1A1A4G5 178 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SH3PXD2BA1X283 911 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 TRAPPC13A5PLN9 417 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 EFCAB7A8K855 629 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 A8MUA0 341 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 HCRTR1O43613 425 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 ALOX12BO75342 701 aa4.11□□□□□ -1.75
VPS29-212ENST00000621131 SNRNP200O75643 2136 aaKnown RBP4.11□□□□□ -1.75
VPS29-212ENST00000621131 KCNK2O95069 426 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms