RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MMP26Q9NRE1 261 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 OR5V1Q9UGF6 321 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 TMEM5Q9Y2B1 443 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 PCDHGB1Q9Y5G3 927 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 ARHGAP32A7KAX9 2087 aa15.01□□□□□ -0.01
SHKBP1-227ENST00000602011 PRSS37A4D1T9 235 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 F5H0A9 414 aaPredicted RBP15□□□□□ -0.01
SHKBP1-227ENST00000602011 SLC22A2O15244 555 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 DOK2O60496 412 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 IL13RA1P78552 427 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 PAX8Q06710 450 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 ZBED5Q49AG3 693 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 PGM2L1Q6PCE3 622 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 BTNL3Q6UXE8 466 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 ZNF730Q6ZMV8 503 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 MBOAT2Q6ZWT7 520 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 OR13G1Q8NGZ3 307 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 PLEKHA8Q96JA3 519 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 TMEM120AQ9BXJ8 343 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 MIOXQ9UGB7 285 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 STARD10Q9Y365 291 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 PPIAL4AQ9Y536 164 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 TGP01266 2768 aa15□□□□□ -0.01
SHKBP1-227ENST00000602011 TRAV27A0A087WT01 109 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 TEX13CA0A0J9YWL9 993 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 TRAPPC2LH3BP13 241 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 TMEM178BH3BS89 294 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 NDUFAB1O14561 156 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 TMPRSS2O15393 492 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 PIP5K1CO60331 668 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 KHDRBS3O75525 346 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 RNASE1P07998 156 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 WNT2P09544 360 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 SRP9P49458 86 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 BPIFB3P59826 476 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 BAMBIQ13145 260 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 FHL1Q13642 323 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 ZNF181Q2M3W8 571 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 FBXW12Q6X9E4 464 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 C9orf139Q6ZV77 190 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 VASH1Q7L8A9 365 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 CYP4Z1Q86W10 505 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 GLB1L2Q8IW92 636 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 CLDN22Q8N7P3 220 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 C1QTNF5Q9BXJ0 243 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 MS4A7Q9GZW8 240 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 NMNAT1Q9HAN9 279 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 SAR1AQ9NR31 198 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 ZNF69Q9UC07 566 aa14.99□□□□□ -0.01
SHKBP1-227ENST00000602011 A0A087WUU8 490 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 LOC100653049A0A140TA62 436 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 OR6C6A6NF89 314 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 LRRC30A6NM36 301 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 KRT34O76011 436 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 HNRNPA0Q13151 305 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 ZMYND11Q15326 602 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 IFI44LQ53G44 452 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 ADCK1Q86TW2 530 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 IGFN1Q86VF2 1251 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 C1orf87Q8N0U7 546 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 ATG16L2Q8NAA4 619 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 OR52E2Q8NGJ4 325 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 OR1F12Q8NHA8 337 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 ITLN1Q8WWA0 313 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 ZNF582Q96NG8 517 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 OR2V2Q96R30 315 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 SIGLEC11Q96RL6 698 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 SLITRK2Q9H156 845 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 GCM1Q9NP62 436 aa14.98□□□□□ -0.01
SHKBP1-227ENST00000602011 SELEP16581 610 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 KCNMB1Q16558 191 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 KLF17Q5JT82 389 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 Q6ZR03 302 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 FAM122BQ7Z309 247 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 GJC3Q8NFK1 279 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 OR8G5Q8NG78 346 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 ERGIC1Q969X5 290 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 APOBEC3DQ96AK3 386 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 ZNF570Q96NI8 536 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 HOPXQ9BPY8 73 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 EMC7Q9NPA0 242 aa14.97□□□□□ -0.01
SHKBP1-227ENST00000602011 A0A1B0GUS0 222 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 DNAJC9-AS1A6NH13 148 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 FFAR1O14842 300 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 NDUFB2O95178 105 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 SCG5P05408 212 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 SDHAP31040 664 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 SPRNQ5BIV9 151 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 DNM1P34Q6PK57 102 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 FKBP9P1Q75LS8 142 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 CBLL1Q75N03 491 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 NLRC3Q7RTR2 1065 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 OR13C2Q8NGS9 318 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 RP9Q8TA86 221 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 RAB40AQ8WXH6 277 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 Q96M85 177 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 DUX5Q96PT3 197 aa14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 GPX7Q96SL4 187 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-227ENST00000602011 SSBP3Q9BWW4 388 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms