RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 P4HA3Q7Z4N8 544 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF676Q8N7Q3 588 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 GJC3Q8NFK1 279 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 OR10S1Q8NGN2 331 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 OR13C5Q8NGS8 318 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 NIPAL2Q9H841 368 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 AHRRA9YTQ3 701 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 RPL36A-HNRNPH2H7BZ11 118 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 PNPP00491 289 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 KIR3DL2P43630 455 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 HIST1H3AP68431 136 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 CEACAM16Q2WEN9 425 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 WDR38Q5JTN6 314 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 HIST2H3PS2Q5TEC6 136 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 KLHL24Q6TFL4 600 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 HIST2H3AQ71DI3 136 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 CATSPERDQ86XM0 798 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 APH1AQ96BI3 265 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 ALKBH3Q96Q83 286 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 TPK1Q9H3S4 243 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 SLC7A10Q9NS82 523 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 CLCF1Q9UBD9 225 aa15.55■□□□□ 0.08
SHKBP1-224ENST00000600718 ARPC4-TTLL3A0A0A6YYG9 625 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 DVL2O14641 736 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 RER1O15258 196 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 ARL6IP5O75915 188 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 CST2P09228 141 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 CLEC2LP0C7M8 214 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 GSTT2P0CG29 244 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 GSTT2BP0CG30 244 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 MYL9P24844 172 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 MMP16P51512 607 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 TAF13Q15543 124 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 TPRA1Q86W33 373 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 OR6Q1Q8NGQ2 317 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 GMPPAQ96IJ6 420 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 FOXB1Q99853 325 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 BARHL1Q9BZE3 327 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 PPIL3Q9H2H8 161 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 FBXL3Q9UKT7 428 aa15.54■□□□□ 0.08
SHKBP1-224ENST00000600718 A0A075B6Q4 140 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 A0A087WV48 116 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 TMEM269A0A1B0GVZ9 245 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF879B4DU55 563 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 LOC110117498-PIK3R3F6TDL0 507 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 UCHL1P09936 223 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 NRN1LQ496H8 165 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 NUFIP2Q7Z417 695 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 ZNF100Q8IYN0 542 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 CADM3Q8N126 398 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 LRRC18Q8N456 261 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 IL17RDQ8NFM7 739 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 RGP1Q92546 391 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 TRIB1Q96RU8 372 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 PNRC2Q9NPJ4 139 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 EMC9Q9Y3B6 208 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 TRAV1-2A0A0B4J238 106 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 AGTR1P30556 359 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 GRB2P62993 217 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 CXADRP78310 365 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 MFGE8Q08431 387 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 Q499Y3 187 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 KRTCAP3Q53RY4 240 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 FAM27D1Q5T7N8 215 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 OR5M9Q8NGP3 310 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 GPR148Q8TDV2 347 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 GPR137Q96N19 417 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 OR14A2Q96R54 314 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 CRNNQ9UBG3 495 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 UPB1Q9UBR1 384 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 OR52A1Q9UKL2 312 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 GTF2A1LQ9UNN4 478 aa15.53■□□□□ 0.08
SHKBP1-224ENST00000600718 DCHS1Q96JQ0 3298 aa15.52■□□□□ 0.08
SHKBP1-224ENST00000600718 TRBV5-5A0A0J9YX44 114 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SHISA3A0PJX4 238 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF587BE7ETH6 402 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SS18L1O75177 396 aaPredicted RBP15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 MAPK3P27361 379 aaPredicted RBP15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 HSD11B1P28845 292 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 HNRNPA0Q13151 305 aaKnown RBP15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SF3B4Q15427 424 aaKnown RBP eCLIP15.52■□□□□ 0.071e-6■■■■■ 60
SHKBP1-224ENST00000600718 FAM180AQ6UWF9 173 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SYT9Q86SS6 491 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SLC22A24Q8N4F4 322 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 THRSPQ92748 146 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 WNT2BQ93097 391 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 WACQ9BTA9 647 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 G6PC2Q9NQR9 355 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 DDX28Q9NUL7 540 aaKnown RBP15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 SLC22A13Q9Y226 551 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF407Q9C0G0 2248 aa15.52■□□□□ 0.07
SHKBP1-224ENST00000600718 IGHV3-9P01782 118 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 CTSSP25774 331 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 CD300CQ08708 224 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 ZNF704Q6ZNC4 412 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 BTLAQ7Z6A9 289 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 FAM122AQ96E09 287 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 FBXO17Q96EF6 278 aa15.51■□□□□ 0.07
SHKBP1-224ENST00000600718 DERL3Q96Q80 235 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms