RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 FANK1Q8TC84 345 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 TMEM101Q96IK0 257 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 DNAJC1Q96KC8 554 aaKnown RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 PKNOX2Q96KN3 472 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 C9orf72Q96LT7 481 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 RARRES2Q99969 163 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 BCL7BQ9BQE9 202 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 TEKT3Q9BXF9 490 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ANKRD60Q9BZ19 345 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 OR11A1Q9GZK7 315 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 LYRM4Q9HD34 91 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF282Q9UDV7 671 aaPredicted RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 Q9UF83 564 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 AKAP11Q9UKA4 1901 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 IGLV3-22A0A075B6J6 115 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF701M0R085 212 aaPredicted RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 XKRYO14609 159 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 EIF4E2O60573 245 aaKnown RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CCNB2O95067 398 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 TIMP1P01033 207 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 S100A9P06702 114 aaKnown RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 GIG44P09565 113 aaPredicted RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CSF3P09919 207 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CT45A6P0DMU7 189 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CT45A5P0DMU8 189 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CT45A7P0DMV0 189 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CCR8P51685 355 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 TWF1Q12792 350 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 TCP10Q12799 353 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 PDIA2Q13087 525 aaKnown RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 SELENBP1Q13228 472 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 MRPL23Q16540 153 aaKnown RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CT45A1Q5HYN5 189 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 H3F3CQ6NXT2 135 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 C8orf31Q8N9H6 132 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CCDC54Q8NEL0 328 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 OR2L5Q8NG80 312 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 OR10R2Q8NGX6 335 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CT45A3Q8NHU0 189 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 MITD1Q8WV92 249 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 TMEM54Q969K7 222 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 CIDECQ96AQ7 238 aaPredicted RBP3.38□□□□□ -1.87
PABPN1-204ENST00000554062 C16orf74Q96GX8 76 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 P2RX4Q99571 388 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 ZC4H2Q9NQZ6 224 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 SLC17A4Q9Y2C5 497 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 SSC5DA1L4H1 1573 aa3.38□□□□□ -1.87
PABPN1-204ENST00000554062 COL1A1P02452 1464 aaPredicted RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 A8MUA0 341 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 E7ENQ6 273 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 SCAMP2O15127 329 aaKnown RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 EIF3HO15372 352 aaKnown RBP eCLIP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 HDAC3O15379 428 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 AKR7A2O43488 359 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 CLIC3O95833 236 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 UBCP0CG48 685 aaKnown RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 SMIM10L1P0DMW3 83 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 NUP62P37198 522 aaPredicted RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 AQP2P41181 271 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 SLC11A1P49279 550 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 STXBP1P61764 594 aaKnown RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 ITIH4Q14624 930 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 TRAM2Q15035 370 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 PSMD5Q16401 504 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 HIKESHIQ53FT3 197 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 AGBL2Q5U5Z8 902 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 C6orf89Q6UWU4 347 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 HDDC2Q7Z4H3 204 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 TMEM150AQ86TG1 271 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 ZADH2Q8N4Q0 377 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 INO80EQ8NBZ0 244 aaPredicted RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 PROKR2Q8NFJ6 384 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 OR2A1Q8NGT9 310 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 OR5K2Q8NHB8 316 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 LYPD6BQ8NI32 183 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 DTX3LQ8TDB6 740 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 MCOLN3Q8TDD5 553 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 ARPC1AQ92747 370 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 SMIM10Q96HG1 83 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 ACTR3CQ9C0K3 210 aaPredicted RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 CWH43Q9H720 699 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 UGT1A10Q9HAW8 530 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 PXMP2Q9NR77 195 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 STOX2Q9P2F5 926 aaPredicted RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 MYEF2Q9P2K5 600 aaKnown RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 CLCF1Q9UBD9 225 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 MTRF1LQ9UGC7 380 aaKnown RBP3.37□□□□□ -1.87
PABPN1-204ENST00000554062 XIRP2A4UGR9 3374 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 RFX7Q2KHR2 1363 aa3.37□□□□□ -1.87
PABPN1-204ENST00000554062 OTOFQ9HC10 1997 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CASP8AP2Q9UKL3 1982 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 IGKV3D-20A0A0C4DH25 116 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 A0A0G2JN53 185 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 TMEM120BA0PK00 339 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PSMB11A5LHX3 300 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PES1O00541 588 aaKnown RBP3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PEX7O00628 323 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PHOX2AO14813 284 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms